Silurus meridionalis (southern catfish): 124391447
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Entry
124391447 CDS
T08004
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124391447 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124391447 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124391447 (grin3bb)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124391447 (grin3bb)
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124391447
NCBI-ProteinID:
XP_046713973
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Position
9:26213100..26261443
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AA seq
1121 aa
AA seq
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MNLICPGLLVYFFHLGLYQVTLRCLIAPVLSHPQPCRVLAQVGHTVRLGVLLPSRRPVRV
RAALDRALSDMAESGTRLLPYNLSMDVVAREPADGDPESLFRCVCQSIVVQGVSAVLAFP
QSQDELVQVEFMSSFLEIPFVSILEHGEPLRTENRFHLQMMTRIPVSDLAELLLTVLQRS
GWHEGMALLCQGWEEAGLLDLLKLHGDEAKGTSRWYLRATLNLSDNSLDQKSISDFLEQH
FSQDQHPPSSVLLLGSDPQCASAVLRSAHDLGLTLPTMHWIMGYPLSPDALQSIGLPLGL
LAYGEVDLKPLDFYIRDSLQLVSRAVAAATLVRPDLALIQNMVNCFDKPNKHELPSSGQY
ISRFLSNTTFMGLTGAVSVQRNISRVLTSQRVHIWRLRRDAVGQPTWVTVGSWEGTHLDV
EERGLWQSSTPRQRTEAQKGHERSRWRPGFPVSGSRVRVVTLVEHPFVFTREVDEDGNCP
AGQYCLDAGSNSSDTLDRVFAMRAQGNNTFIPADYSKCCYGYCIDLLEKLAEDMNFEFDL
YIVGDGKYGAWKGGRWTGLVGDLLNGVADMAVTSFSINSARSKVMDFTSPFFSTSLGILV
RSKDTAAPIGAFMWPLHWSMWVGIFVALHMTALFLTLYEWKSPFGMTPHGRNRVKVFSYS
SALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEL
SGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPDGVATLKTDPP
KLDAFIMDKALLDFEVSIDAECKLLTVGKPFAIEGYGIGLAQNSPLTSNISEFISRYKSD
GYMDMLHDKWYKVVPCGKRVFAMTETLQMGIRHFSGLFVLLCVGVTGALLTLAGEHAFYR
LVLPHIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRANTEKSCNIQKSQPAQPPAPPPP
GTFAKWNNESSRAAKELKDNKRVHFNLETLNTRRLLARVVAEGGQGTSGSASGDGSGPGP
APSASRVSRVCENGGPVPLQPLPSSPPPLTEPPKDGELEELQVKIEEIRGQLRDALARRA
QLQTALAKERAASVVPLTQEGPPTVTATICRSLVKDLEGKR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgatctgccccgggctcttggtgtacttcttccacttaggattgtaccaggtg
acgctccggtgcttgatcgccccggtcctctcgcacccgcagccgtgccgcgtgctcgcc
caggtcggtcacaccgtgcgcctcggcgtgctcctgccctcgcggcggcccgtgcgcgtt
cgagccgcgctggaccgcgcgctcagcgacatggccgagagcggaacccgcctcctgccc
tacaacctgagcatggacgtggtagcgcgcgagccggccgacggtgaccccgagtcgctc
ttccggtgcgtgtgccagtccatagtggtgcagggggtctccgcggtgctcgcgttcccc
cagagccaggacgaactcgtgcaggtggaatttatgtcgtcgtttctggagattcccttc
gtgagcatcctggagcacggagagcctctaagaaccgagaaccgatttcacttgcagatg
atgactcggatccctgtatcagacctggcggagctgctgttgacggtgctgcagcggagt
ggctggcatgagggcatggctttactctgccagggctgggaagaagctggccttctcgac
cttctgaagctgcatggtgacgaggcgaagggcacctcacgttggtacctccgcgccacc
ctcaacctttctgataattctttagaccaaaaaagcatatcagattttctggagcagcac
ttcagccaggaccaacatcctccatcgtcggtgctgcttcttgggtccgatccacaatgc
gcctctgccgtgctgcgcagtgctcatgacctcgggcttacgttacctaccatgcactgg
attatgggatatccattaagccccgatgccttgcagtccatcggcttacccctggggctg
ctggcctacggagaggtcgacctcaaacctctggacttttacattcgcgacagtttacag
ctggtcagtcgagcagtcgctgctgctacgctcgtgcggccagatcttgcgctcatccaa
aatatggtgaattgttttgataaacccaataagcatgaactgccttcatctggacagtac
atttccaggtttctctcgaacacaaccttcatggggttgactggagcagtcagcgtgcaa
cgcaacatttcacgcgttcttacatctcagcgcgtgcacatctggaggcttcggcgcgat
gccgtgggccagcccacctgggtgacggtgggcagctgggagggcacccacttggatgta
gaggagcgaggtctgtggcagagctcaaccccacgccaacgcaccgaggcacaaaaaggt
catgagcgcagtcgctggaggcccggattccccgtttctgggagtcgcgtccgcgtagtc
acccttgtcgagcatccgtttgtgttcacgagggaggtggacgaggatggtaactgcccc
gcaggacagtactgcctggatgcagggagcaacagttcagacacactggatcgtgttttt
gccatgcgagcacaagggaataacacgtttattccagcggattacagcaagtgctgctat
ggttactgcatcgacctgctggaaaagctggctgaggacatgaactttgaatttgacctt
tacattgtgggagacgggaaatacggggcatggaaaggtggccgttggacaggactggtc
ggagacctgctaaacggcgtggctgatatggccgtcaccagcttcagcatcaactcggca
cgcagcaaagtcatggacttcaccagccctttcttctccaccagcttaggcatcctggtg
cgcagcaaggacacggcagcacccatcggagctttcatgtggccactgcactggtccatg
tgggtgggcatctttgtagcactgcacatgacggcactcttcctcaccctttatgagtgg
aaaagcccgtttggcatgactccacacgggcgtaaccgcgttaaggtgttctcctactcc
tcagcccttaacctgtgctacgccattctgtttggtcgtacggtatcgagtaagacgccc
aagtgctggacaggacgattcctcatgaacctgtgggccatcttttgcttgttagttttg
tccagttacacagccaaccttgctgcagttatggttggggaaaagacctttgaagagctt
tcaggcattcatgatgccaaactccatcacccctcccaagggttccgctttggcacggta
cgtgaaagcagtgccgaggactacatgaagaaaagcttccctgaaatgcacgaatatatg
aggaggttcaacgagcccaccacgccagatggtgttgctactctcaagacagatccccct
aagctggacgctttcatcatggacaaagctctgctggacttcgaggtatccatcgatgct
gaatgtaaactgttgacggtcggtaaacccttcgctatcgaaggttacggaatcggactc
gcccagaactcgcctctcacatccaacatttcagagttcatcagccgatacaaatcggac
ggctacatggacatgctgcacgacaagtggtacaaagtggttccctgcggaaagagagtc
ttcgccatgacagagacgctgcagatgggcatccgtcatttctcagggctgtttgtgttg
ctgtgtgtgggtgtgaccggggccttactcactctcgcaggtgaacacgccttctaccga
ctggttctgcctcacatccgccgccggcaaaaattcaaatactggctccataccagccag
aaaattcaccgagcgttgaacatgacttacgaggacgtgaagcgtcagagagccaacaca
gagaaaagctgtaatattcagaaatcccagccggcacaacctccagcacctccgccaccc
ggaaccttcgccaagtggaataacgagagcagccgagccgccaaagagctcaaggacaac
aagagggttcacttcaacctagagacgctgaacacgcgccgcctcctcgcccgcgtcgtc
gcagaaggtggacagggtacttcaggatctgcatctggagacggttctggtcctggacct
gcgcccagtgcaagtcgtgtctcgagagtgtgtgaaaacggtgggccggtccctttacag
ccactcccgtcctctccgcctcctttgacggagcctccgaaggatggagagctggaggag
ctgcaggtgaagatcgaagagatccgtggtcagctgagggatgctcttgcgcgtcgggcc
caactccaaacagctctcgccaaagaacgcgctgcttccgtggttccactgacccaagag
ggaccacctacggtcacggctacgatttgccgctccctggtcaaagatctggaaggaaaa
aggtga
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