Silurus meridionalis (southern catfish): 124393475
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Entry
124393475 CDS
T08004
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00780
Biotin metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
124393475 (hlcs)
Enzymes [BR:
smeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
124393475 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
124393475 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
124393475 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
124393475 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
124393475
NCBI-ProteinID:
XP_046717300
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Position
11:15437416..15470219
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AA seq
873 aa
AA seq
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MLITLCYVYLWVRFQRCYTGLIKSVVFRLRANRSSFAFCEQSFTSLQSRTSAEETLFLQL
GNKVLYITEPQACDDLSKWTLLLRSSLITAPKLDNVAFIIEAKTKQTAVQSRPTSTKKVL
NWSDYCLPLACSPGQQYRAVAEASLDNFSTIGVAFLEDRLRMENGLIPEKIVSVLLRESA
LKELIEKQQLGQEKKSNPVLSSLPKDTVLSPEDISQDLGKSAGVASCYQQVEPEHKTDHH
HMDGHHLHLSSCHECLELENSTIQSVKYASVENIPDLPDDGTGTDVEEEVDESFSGWGRS
DNTNGKPPNILVYTGGCEERYRQVHSLLAECIDTDRYAVYPLRPQQALEEPWLENTLLLV
TVTEEELTPGLQLRFLTYLGQGGKVLGLSSSLCPAGLRLQSREEQRGQICRLNFTKSDST
EVQLSVLASGKVYIREEHDACSGEVELWGELCGEGEEAKEMAIVRITHGQDGGEAILCQV
HLESAPDSEQVQDSAGFSELKMSNAKRYEILTEILTSLGISCELNQVPQPSPIYLLFTQS
KLKNAFVRWLREHVDDKGTLRSQKTCLRVIWGQEELSELGSGELALHTEAPEIFSEHFSM
ETYRQHLQSQRLGHTLLYTDVTPTTMDLLEGLMLQIPEDLGLIAVAARQTKGKGRGGNTW
LSPLGCAMFTLHLRVAVNSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIY
YGNLMKLGGVLVTSTVMGSTFHLLIGCGFNVSNSNPTICINDLVVRQNRERGSKLSPLSP
AQLMGRSVTLLEQLISEFQLHGPEAVLPIYYKRWVHGGTKVRLWSEDGPEAEVVGLDDHG
FLQVSSQDQGLVSVQPDGNSFDMLRNLVITKHN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgctatgctacgtttacttgtgggttcgttttcagagatgctacacgggg
ctcattaagagtgttgtgtttaggctgcgggcaaaccggagcagcttcgccttttgcgag
cagagtttcaccagcctgcagagtcgcacttcagccgaggagacgcttttcctccagctg
ggcaacaaggttctatacattaccgagccccaggcatgtgatgacctgagcaagtggact
ctgttgctccgctcttctttgattactgctccaaaactagacaacgtcgcctttattatt
gaagctaaaacaaaacagacggctgtgcagtctcgtccaacatcaaccaaaaaagtgctg
aattggtcagattactgtcttcctctggcctgcagcccaggacagcaatacagggcagtg
gctgaggcgagcctggacaatttcagcacaatcggagtggcttttctggaagaccggctg
cgaatggaaaatggcctcattcctgaaaaaatagtttcggtgttgctcagggaatctgca
ctcaaagagctcattgagaaacaacaattaggccaggagaaaaagtctaacccagtttta
agcagccttcccaaagacactgttttgtctccggaagatatttcacaagacctcgggaag
agcgcaggcgtagcatcctgttaccagcaggtggaaccagagcacaaaacagaccaccat
cacatggatggccaccacctgcacctctccagctgccacgagtgcctggagttggagaac
agcaccatccagtcagttaaatacgcttcagtcgaaaacatcccggacctgcctgatgac
ggcacaggcactgatgtagaggaggaggtcgacgagagtttctcgggatggggaaggtcc
gacaatacaaacggcaaaccgcccaacatacttgtatacacaggcggatgtgaggagcgc
tacaggcaagtgcattcacttctggctgaatgcatcgacaccgaccgctatgcagtctac
cccctgcggccacaacaggcactagaagaaccgtggctagaaaacacattgctcttggtg
acggtcacagaagaagaacttacccctgggctgcagctgcgctttctgacatacctaggc
caaggtggtaaagttcttggtctgtccagttcgttatgtccagctgggctcaggctgcaa
tcccgagaggagcaacgaggccaaatctgcaggctgaacttcaccaaatctgatagcaca
gaggtccagctaagtgtgttagccagcggaaaggtttacatacgtgaagagcacgatgcc
tgcagcggagaagtggagctgtggggggagctgtgtggcgaaggtgaagaggcaaaagaa
atggctatcgtcagaatcactcacggccaggatggtggagaagctatattgtgtcaggtg
catttggagtcggctccagactctgaacaggtgcaggatagtgcgggcttttccgagctt
aaaatgagtaatgcaaaacgctacgagatcctgacagaaattctcacctcactagggatt
agctgcgaactcaaccaggtgcctcaaccaagccccatttacctacttttcacccagtcg
aagctcaaaaatgcttttgtgcgctggctaagagagcacgtggatgacaagggcactttg
cgatctcaaaaaacctgcttgagggtgatatggggccaagaggagttgagcgagttgggc
agcggagagctagcactgcacaccgaggccccagaaatcttctccgagcatttcagcatg
gagacctacaggcagcacctgcagagccagcggctaggacacacactgctctacactgat
gttactcctaccaccatggacctgctagagggattgatgttgcaaatacctgaggatctg
gggttaattgccgtggcagcacgtcagacgaagggtaaaggacgaggaggaaacacgtgg
ttgagtccgctgggatgcgccatgttcacattgcacttgcgagtagcagtaaactcccga
ctcggccagaggatcccattcctgcagcacttggccgctctggctgtagtggaggcagtt
cgcacactgcctggataccaggacattgacctgagagtgaagtggcccaatgatatttac
tatggtaacctgatgaagctggggggagttttggtcacatcaacggtgatgggatccacc
tttcaccttctcattggttgtgggtttaatgtgagcaacagtaaccccaccatctgcatt
aatgacctggtggttcggcaaaaccgtgagcgagggagcaagctgagtcctctaagccca
gcacagcttatgggccgctctgtcactctgctagagcagctcatttctgagtttcagctg
catggtcctgaagcagttctacccatttattacaaacgatgggtccatggtggtacaaag
gtgcggttgtggagcgaggatggtcctgaggctgaggtggtaggactggatgatcacggc
ttcctgcaggtgagctctcaggaccagggtctggtgtctgttcagccagatggaaactcc
ttcgacatgctgagaaacctggtcatcaccaaacacaactag
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