Silurus meridionalis (southern catfish): 124393619
Help
Entry
124393619 CDS
T08004
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124393619 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124393619 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124393619 (grin3a)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124393619 (grin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124393619
NCBI-ProteinID:
XP_046717509
LinkDB
All DBs
Position
11:complement(21124106..21137853)
Genome browser
AA seq
1191 aa
AA seq
DB search
MRNGCLESRLESLGIQPIARSAALPRAGRYRRSVPTGAGRGAGDGSADAVFSPCASRAID
CVDGMPGAGIWDTLGMLVLLRLLASGALVLVLTPTCLLAHPQPCQILKRIGHTVRVGAVH
LQPRAVTHVSQRTDWDAVGETAWERFELVRRSGSDPGLSAVRTKGSTANHKQSAQSKNVH
RRVESAFQPRDSIFLAAETLNRLPDLLPYNLSLEIVMAVEIGLGELPAFSFSSSPPPVSS
DPMSFLQSVCHTVVVQGVSAIMAFPENRDEYVKLEFVSSTMHIPVISVVHSEFTRQSRNS
LHFQMAMQNPQTPQADLIYSLLSINNWYDVSLLMCQNLNLSQFVFLLRNNSRFHLGTIFN
ISSNSSNKNDFQTSLQSHMTSIKDITSTIVTFGCDIRDIKRIFITIAKLGLVLPVYHWII
GDAQNVEELRTDGLPMGIMAHGRMRQPALDHYVQDSLEFIARAVGSAATVSPKLALIPGI
TNCMVIEDRNLTSGKYLSRFMDNTSFDGLSGYIHVQDGSIISESHHFIWNLQHDPLGNPA
WTRLGSWKQGKVVLDYGVWPSKKHSHPEGDRRRSSRLHLRVVTLVEHPFVFTREVDDDGQ
CPAGQLCLDPLTNDTALLDALFHDLQLRNSTVPTELKKCCYGYCIDLLEKLAEDVGFDFD
LYIVGDGKYGAYKNGRWTGLVGDLLSGAAQLAVTSFSINSARSQVIDFTSPFFSTSLGIL
VRTRDTAAPIGAFMWPLHWSMWLGIFASLHVTAVFLTLYEWKSPFGMTPKGRNRDRVFSF
SSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQ
LSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNVPTTPEGIDHLKDDP
QKLDAFIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQYKS
DGFMDMLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCVGVALSLLTTIAEHVVH
RWVIPKMQNKPQYWLHTSQRLHRALNPTFNEDKLSTVAKPEKRCNIGNNQQNLWNVCENS
VCTGHSNQEEQQNNLECLQCKELPSHSPPPPSSSPAHPPPPGPPVPPQLKRQLPLQSNGK
TDSLGLAHSPIVQELTDLETHIQIIKQQLQLAMKKKRELEQYQRTNMAPES
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacggttgtttggagtcgcgtttggagtcactcgggatccagccgatcgcgcgg
agcgcagctttaccgcgtgccggacgttaccggaggagcgtgccaaccggcgctggacgc
ggtgcaggagacgggagcgcggacgcggtcttctccccgtgcgcgtcgagggcgatagac
tgcgttgacgggatgccgggtgcggggatttgggacacactgggcatgttggtgctgctc
cggttgctcgcgtcgggcgctctggtgctcgttttgacgcccacgtgcctcctcgcgcac
ccgcagccatgccagatcctgaaacgcatcgggcacacggtgcgagttggggccgtgcat
cttcagccccgcgctgtgacgcacgtttcacagaggacggattgggacgcggtcggagaa
acagcttgggaacggttcgagttggtcaggagaagtggaagtgacccaggtctgagtgct
gttaggacaaaaggctccacggcgaaccacaaacaaagcgcgcaaagtaaaaacgtgcac
aggcgagtggagagcgcgttccaacccagagactccatcttcctggccgcggagaccctg
aaccgattaccggacctgttaccgtacaacctgtccctggagatagtcatggctgtggaa
ataggactgggtgagctgccggctttctccttttcctcttcacctccacctgtgagttcc
gaccccatgtcgttcctgcagagcgtgtgtcacacggtcgtggttcagggagtttcagcc
atcatggcgtttcctgaaaacagagacgagtacgtcaagttggagttcgtgtcctccaca
atgcacatcccggtcatcagcgtcgtccacagcgagttcacgcgccagagtcggaactcg
ctccattttcagatggccatgcagaacccccagactcctcaggcagacttaatctactct
cttctttccattaataattggtacgatgtgagcctgctgatgtgccagaacctgaatctt
tcccaattcgtctttctgcttcgcaacaactcgagatttcacctgggcaccatattcaac
atttccagcaacagcagcaacaaaaatgacttccagacatcgctgcagagtcacatgacc
tccatcaaggacataacatccaccattgtgactttcggatgtgacattcgggacataaag
aggatcttcataacaatagcaaagcttggtttagtactgccagtctaccactggattata
ggggatgcacagaacgtggaggagttgaggactgacgggctgccaatgggcattatggcg
catgggcgaatgaggcagcctgctctggatcactacgtccaggactctttggagtttatt
gccagggctgttggatcagctgctactgtgtctccaaagctggctcttatccctggcatc
acaaactgcatggtgattgaggatagaaatctcacctcaggaaaatatctgtccaggttt
atggacaacacatcgtttgatgggctaagtggttacattcatgttcaggatggatccatt
atctcagaaagccatcactttatttggaatctgcagcatgacccattagggaaccctgca
tggacgcgactcggcagctggaagcagggtaaagtggttctagactatggtgtatggcct
agcaagaaacattcccacccagaaggcgataggaggcgttcatccaggttgcacctgcgg
gttgtgactctggttgagcacccgtttgtatttacacgagaggtggatgacgatggtcag
tgcccggcagggcagctgtgcctcgacccgctcaccaacgacacagcgcttcttgatgcc
ctgttccatgacctgcagttgaggaacagcacagtgcccactgagctcaagaagtgctgc
tatggatattgcatagacctgctggagaagctggctgaggatgtgggttttgacttcgac
ctctatatagtaggagatgggaagtatggtgcctacaagaacggccgctggacaggcctg
gtgggtgacctgctgagtggtgcagcgcagctggctgtcacttcttttagcatcaactca
gcacgcagtcaggttatagacttcaccagccccttcttctctaccagcctgggcatcctg
gtgaggaccagagacacggcagcacccatcggcgccttcatgtggcccttacactggagt
atgtggctggggatttttgcatcacttcatgttactgctgtatttcttaccctgtatgag
tggaagagtccatttgggatgacgcctaaaggcagaaacagggaccgtgtcttctccttc
tcttcagcactcaatgtttgctatgccatcttgtttggcaggacagctgccatcaagcca
cccaagtgctggacaggccgctttttaatgaacctctgggccatattctgtctcttctgc
ctctccacctacacggccaatctggctgcggtgatggttggggaaaagacatacgagcag
ctttcaggtatccatgaccccaagctccatcatccatcgcaaggttttcgatttgggact
gtacgagaaagcagtgctgaggattacgtaaaaaaaagcttcccggagatgcacgaatac
atgaggcgatataatgttcctacaacccctgaaggaatagaccaccttaaagatgatcct
cagaaacttgatgcttttattatggataaagccctcttagactatgaagtgtccattgat
gctgattgtaaaactcttacagttgggaaaccatttgcaattgaaggctatggcattggt
ctcaaacagaactcacctctgacttcaaatatctcagagctggttagccagtacaagtct
gatggatttatggacatgctgcatgataagtggtacaaagtggtgccctgtggaaagcga
agttttgctgtgacagagactttacagatggggattaaacatttctcagggttattcgta
atgctgtgcgtaggagttgctttgtctctcctcaccactattgctgagcacgttgtccat
cgctgggtgataccaaagatgcagaacaagccacagtactggcttcatacaagtcaaagg
ctgcatcgagcacttaacccgaccttcaacgaagacaaattatcaactgttgcaaaaccg
gaaaaaaggtgcaacattgggaacaaccagcaaaatctctggaacgtctgtgaaaactca
gtctgcactggtcactccaatcaagaagagcagcagaacaacctggagtgtttgcagtgt
aaagagctcccttcacattctcctcctccaccttcttcttctcctgctcatcctcctcct
cccggtcctcccgttcctcctcaacttaagagacagcttcctctgcagtcgaatggcaaa
acagactcgctgggccttgcacacagccccatagtgcaggagctgactgacctggagacc
cacattcagatcatcaagcagcagctgcagctggccatgaagaagaaaagggagctggaa
cagtaccagagaaccaacatggctccagagtcttag
DBGET
integrated database retrieval system
