Silurus meridionalis (southern catfish): 124394248
Help
Entry
124394248 CDS
T08004
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124394248
Ion channels [BR:
smeo04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
124394248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
VWA_3
VWA_CoxE
MG2
vWA-TerF-like
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
124394248
NCBI-ProteinID:
XP_046718340
LinkDB
All DBs
Position
12:complement(4361091..4375332)
Genome browser
AA seq
894 aa
AA seq
DB search
MAKMLVVLLLFLSALGPVTTIKLDGNGYTDILIVINPAVPENGELINQIKKMVTGGSTYL
FEALDRKVYFKEVKILVPPNWTSGIYERARTESFDKGKIRIDKPHPSFGDDPYTLQPEGC
GIEAKYIHFTPNFLLNRDLIEVYGPADRVFVHEWAHLRWGVFDEYNTREPFYWSAAGQIQ
PTRCTDKISGKWVEIINQNPTPCQIDASGKPSSSCEFFPDYIQTAKASIMFMQSLFSVKT
FCEEKEHNYEAPNEQNKQCGKATRTVIFENSVDKDALRNLNPLSSVPTPPTFKVIQRGIR
VVCLVLDVSGSMQGLRISQQHRAATIFLNQIIDEQQFVGLVTFSTDAQILSPVTKIDGPA
TREKLISSLPTVASGSTYICKGLRKGFELLRTDDGQTIGDEIIFLTDGEATDNVQACLQE
SVQSGAIIHTLAFGPSADNILRTMADQTDGKFIVAEESILSNQLVDAFSSLTVYDGNSFT
QPIQLESTGTNVKDWFNGTVPIDRSVGNRTTFTIIYERRAPTVNIVSPSGVVYDQRNITD
SANTITFTIPGTAEPGNWRYSFFNKETSAQQMSLTVISRAAHEDVYPVTVTARMDQQTSD
GTKPMVVLAEVSQNYNPVLGASVWANLRSDTGHSVELQLLDNGAGADVFKGDGIYSRYFT
KLKRGKYNLKVRVENQQGAVQVFSSRHSGSLYIPGYIVDGEVKLHPPKPPIDVQPVDVGN
FTRTVTGESFVVDRDTTINFPPNKITDLIAEIKEDTVLLNWTAPGEDFDVGKVKSYEIRW
SDDLKMLQDNFTSCDLDNSSSLVPQESGFAEQYFFQPNITIKNGTTLFFAVQSMDKESTK
SEVSNIARATNYVPGPSPISNQGLNLNAIIISVCVVAIVACVIAVVITWAVKRK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgctagttgtgttgttgctgtttctcagtgcactgggacctgttacaaca
atcaaactggatggaaatgggtacaccgatattcttatagtcatcaatccagctgtgcca
gagaatggagaacttatcaatcaaataaagaaaatggttactggtggatcaacatatctg
tttgaagctttagaccgcaaggtctacttcaaggaagtgaaaatactagtaccaccaaac
tggacatcaggaatttatgagagagcaagaacagaatcatttgacaagggcaaaatacga
atagataagccacatccttcttttggtgacgatccatacactcttcaacccgaaggctgt
ggaattgaagctaaatacattcattttaccccaaacttcttgttaaacagagatcttatt
gaagtgtatggacctgcagacagggtttttgtgcatgaatgggctcacctcagatgggga
gtatttgatgaatataatacgagagaaccattttactggtctgctgctggtcagattcaa
ccgacaaggtgtactgataagatttctggcaaatgggttgaaattattaatcagaatcct
acaccttgccaaattgatgcatctggcaaaccatcatccagctgtgaattttttccagat
tatatacaaactgcaaaggcctcaataatgttcatgcaaagcttattttcagtaaaaact
ttttgtgaagagaaggaacataactatgaagcccccaatgagcagaataaacagtgtgga
aaagcaacacgtacagtaatctttgagaactcggtagacaaagatgcccttcgcaatctg
aatcctttgtcatctgtaccaacacctccgacattcaaagtcatacagaggggaatccgg
gtcgtctgtctcgtccttgatgtctctggaagcatgcaagggctgagaataagtcaacaa
catcgagctgctacgattttcttaaaccaaataatagatgaacaacaatttgtgggtctg
gtgacttttagtactgatgctcaaatactaagcccagtgacaaaaatagatggaccggcc
acaagagagaaactaattagtagcttgccaacagttgcaagtgggtcaacatatatttgt
aaaggactcagaaaaggctttgagcttcttcgaacggatgacggacaaacaataggagat
gaaataatttttctgacggatggagaagcaactgataatgttcaggcatgtttgcaggaa
tctgttcaaagtggtgcaattattcacactttagcttttggcccgagtgcagacaatata
ctgagaaccatggccgatcaaaccgatggcaagtttattgtagctgaggaatctatactt
tccaaccagcttgtggatgccttttcctcattgacagtgtatgatggaaactccttcaca
cagcccattcagcttgaaagcactggaaccaatgttaaagattggttcaatggaacagtt
cccatcgaccggtctgtaggaaaccgcaccacctttacaataatatatgaaagacgtgca
ccaactgtgaatatagtgtcaccaagtggtgtggtttacgatcagagaaacatcactgac
agtgcgaacacaatcactttcactattccaggaactgcagagccaggaaattggaggtac
agcttcttcaataaagaaacatctgcacaacaaatgagtttaacagtaattagtcgggca
gctcatgaagatgtttacccagtcacagttacagccagaatggatcagcagaccagtgat
ggaaccaaacccatggttgtgttggctgaggtcagtcagaattataatcctgtattgggg
gccagtgtttgggcaaacctgagatcagatactgggcactcagtagaacttcaactcctt
gataacggagcaggagctgatgtgttcaaaggtgatgggatctattcaagatatttcact
aaattaaagcgtggaaaatacaatctaaaagtgagagtggaaaatcaacagggagcagtc
caggttttctccagcagacacagtggcagtctgtatatacccggatatattgtggatggt
gaagtgaaattacaccctcctaagcccccaatagatgtgcagccagttgatgtgggcaac
ttcacaagaacagtcactggggaaagttttgtagtggacagagacacaactataaatttc
cctccaaacaagatcacggatctaattgcggaaatcaaggaggacaccgtgcttctcaac
tggacagctcctggtgaggactttgatgtgggaaaagtcaaatcctatgaaatcagatgg
agtgacgatttgaagatgcttcaagataatttcaccagctgtgatctggacaacagttca
tcacttgttcctcaagagtcaggctttgctgaacagtacttttttcagcctaatattaca
attaaaaatggcaccacacttttctttgctgttcagtcaatggacaaagagtcgaccaag
tctgaggtatccaacattgctcgagcaacaaattatgtcccaggaccctcacctatttca
aatcaaggcctgaatctaaatgctatcatcatatctgtctgtgttgtggccatagtggca
tgtgttatagctgtagtcatcacatgggcagtaaaacgtaaataa
DBGET
integrated database retrieval system
