Silurus meridionalis (southern catfish): 124395625
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Entry
124395625 CDS
T08004
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124395625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124395625
03036 Chromosome and associated proteins [BR:
smeo03036
]
124395625
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
124395625
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124395625
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
124395625
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124395625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-C2H2_jaz
SET
zf-C2H2_6
zf-met
zf-C2HC_2
Zn-ribbon_8
Zn_ribbon_SprT
zf-C2H2_3rep
C1_4
Motif
Other DBs
NCBI-GeneID:
124395625
NCBI-ProteinID:
XP_046720261
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Position
13:complement(1152689..1166619)
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AA seq
603 aa
AA seq
DB search
MTPCSPVGSLGEVESTRINEEPCESNTHNELKIIYIKEEEPEEDEYLYCEDCRCFFYNKC
EVHGPALFIHDTPVPLGVTDRARQTLPRGLEVRQSHIPGAGLGVFNGGDTVPVGAHFGPY
QGELVDKEEAMSSGYSWVISRNGQCEQYINARRETYANWMRYVNCSRNDEEQNLVGFQYR
GGIMYRCCRPIRPGQELLVWYDEEYAQDLGITFDFLWSRKCSANELMEVLQLFSCSICHL
TFTAQSYLHRHIRRCHPEEYVRMLQEKAIKSENLESMSSSSGDHGSSWYSNTSQEEMHEC
PDCGMSFSLVSHLEIHQRVHTGEKPYPCSQCGKSFTQQSNLRTHVRIHTGEKPYQCSHCS
KSFTHRSSLHLHQRIHTGERPYRCLYCDKSFVQQSAFQQHQRIHTGEKPYQCSLCGKSFT
QMSSLQLHQSTHTGERPYQCSHCGKSFARQSHLHTHQTTHTEEKPYRCSQCNKSFTLRSQ
LQAHARIHTRDKPYPCSHCGKNFPFLSHLQIHERSHTGEKPFHCSACGKSFIDRGTLKTH
QRIHTGERPYRCSACGKTFTQRSSLQRHQRLHTGDTPHQCLPCGRGFHDLNTFQTHVCTN
QQA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgactccatgctcaccagtgggttctcttggcgaggtcgagagcacgcggataaacgag
gaaccctgcgaaagcaacacgcacaacgaactgaaaatcatctacatcaaagaggaagaa
cctgaggaagatgagtatctctactgtgaggactgcagatgctttttctacaacaagtgt
gaagttcatggtccagctctcttcatacatgataccccagttcccctgggagtcactgac
cgagccaggcagactcttcctcgtggtctcgaggtcagacagtcccatattcctggagca
ggtctgggagtgtttaatggaggagacactgttccagtaggtgctcactttgggccgtat
cagggagaactggtagataaagaggaagccatgagcagtggatactcctgggtgatctcc
aggaatggacagtgtgagcaatacatcaatgccagaagagagacgtatgctaactggatg
aggtatgtgaactgctcacgtaatgatgaagaacagaacctggttgggttccagtatcga
ggtgggatcatgtaccgctgctgtcgccccataagaccaggacaggagctgttggtgtgg
tacgatgaggagtacgctcaggatctcggaatcaccttcgactttctttggagcagaaag
tgctctgcaaatgaattgatggaagttctgcagctcttctcctgctccatatgtcacctt
accttcactgctcagtcctacctccaccgacacattaggaggtgccaccccgaagaatat
gtgaggatgttgcaagaaaaagcgatcaaatccgagaacctggagagcatgagcagctcc
agcggcgatcatggatcttcatggtacagtaacacgtctcaggaagaaatgcacgagtgc
ccggattgcgggatgagttttagtttagtgagccacctggagatacaccagcgcgtccac
acgggggagaaaccgtatccgtgctcacagtgtgggaagagttttactcagcagagcaat
ctccgaacccacgtacgcatccatacgggagagaaaccctaccagtgctcacactgcagc
aagagctttacgcatcgcagtagcctccatctgcaccagcgcatccacacgggagagcgg
ccgtaccgctgcttatactgcgacaagagctttgtacagcagagcgccttccagcagcac
cagcgcattcacaccggagagaaaccataccagtgttcgctgtgtgggaagagcttcact
cagatgagctcgctccagctgcaccagagcacccacacgggagaacgtccatatcagtgc
tcacactgcgggaagagcttcgcccgccagagtcaccttcacacacaccaaaccactcac
accgaggagaagccgtaccgctgctcacagtgcaacaagagcttcacgctccggagtcag
ctccaagcccacgcccgcattcacaccagagacaagccgtacccctgctcacactgtggg
aagaactttccgttcctcagccatctccagatccacgagcgcagtcacacgggagagaaa
cctttccactgctcggcctgcgggaaaagtttcatcgaccgtggaactctcaaaacgcac
cagcgcatccacacgggagagagaccataccgctgctcggcctgtgggaaaaccttcact
cagaggagttcgctccagagacaccagcgacttcacaccggggacacgccgcaccagtgt
ctgccctgtgggcggggcttccacgatttaaatacgtttcaaacacacgtgtgcacaaat
caacaagcttga
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