Silurus meridionalis (southern catfish): 124395810
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Entry
124395810 CDS
T08004
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124395810 (spata5l1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
124395810 (spata5l1)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124395810 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_22
AAA_14
AAA_2
bpMoxR
TIP49
AAA_7
AAA_33
NTPase_1
Viral_helicase1
AAA_25
RNA_helicase
DUF815
Rad17
ABC_tran
NACHT
AAA_19
AAA_18
Vps4_C
AAA_30
AAA_17
MCM
IstB_IS21
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
124395810
NCBI-ProteinID:
XP_046720617
LinkDB
All DBs
Position
13:575089..591130
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AA seq
762 aa
AA seq
DB search
MVLDLVVVPPETSDLGSQRCRLGLVLMEDLGLRLGSPVLVTLQGGASCLCTAWPRPDLAE
AYLQVDPTCSSAQLRPDALRGLRLGSEGLRALNCPRVKRLRVTALVRSGEFKRRTSAQEV
GALAAELLTGLYVHEKHLVDISHAGTPIHSLQVDTVNSGSHKAGRVTPETRVDVVSVRTL
ETYQRWERKGSSVPLGGLEEVYVTLKEMLTLPLRYPISTRRVGVTAGRGALLVGPPGVGK
TQLVRSVAQDVQAALVTVSGPVVVGSRPGESEENLRAAFTRASEAAREEPCVLFIDEIDA
LCPKRSSSTGTPENRLVAQLLTLMDGVGSDEGFVIIGATNRPDALDPALRRPGRFDREIV
VGVPTLQQRYQVLQCVCRSVPLSPNVDLYSIAEKTSGYVGADLSALSREAVLHAILHSTQ
GGAGDSGQSEVEEGDVRMEHFVKAMRMIAPSCLRSSVGVAEFTPVNWERIGGLEEVKLKL
RQSVEWPMKFPEAFVRLGVCRARGVLLYGPPGCAKTTLVKAAASSSHCSFLCVSGAELYS
PYVGDSEKALAQLFQQARACSPSIVFLDEIDSLVGCRGDGGGCRGSSVQAQVLSVLLNEL
DGVGFKTTERRGTGLSERQETRRDQRMQLQEVCNQDVMIVAATNRPDMLDSALLRPGRFD
HIIYVPPPDLQARLAILKLHTEKMPLNSNVCLEDLATRTNLFSGADLENLCKEAALLALH
EEGMSVSTVQQKHFQKVLQHFQPSISSQQLLQLQQLFKHNYN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggatctcgtggttgtgcccccggagacctcggacctggggagccagcgttgt
cgtctgggtctggtgctgatggaggacctcgggctgcgtctcggctccccggtactggtg
acgcttcagggcggagcgtcgtgtctctgtacggcgtggccacgccccgacctggctgaa
gcctacctgcaggtagaccccacctgctcgtcagcgcagctccgcccggacgccctgcgt
ggactccgtctcgggtcggagggtctccgagctctgaattgtcctcgtgtgaagcgtctg
cgcgtgactgcgctggtgcgtagcggagagtttaaacgcaggacgtctgcgcaggaggtg
ggagctcttgctgcagagctgctgacaggactgtatgtccacgagaagcacctggtggac
atctcccatgcaggaacgcccatccactctctgcaggtggacacggtgaactcagggtcc
cataaagcgggacgcgtgacgcccgagacacgtgtagacgttgtgtctgttcggactctt
gaaacgtaccagcgctgggagcgcaaaggttcctctgttcctctgggaggactcgaggag
gtctacgtcacgctgaaggagatgctgacgcttcctctgcggtaccccatcagcacgcga
cgcgtgggcgtgacagcggggcgtggcgcattgctggtgggacccccaggtgtggggaag
acgcagctggtgcgcagcgtggcgcaggacgtgcaggcggcgctggtgacggtgagcggc
ccggtggtggtggggtcgcgacccggggagagcgaggagaacctgcgtgctgcgtttacc
cgggcctcagaagctgctcgagaggaaccctgcgtgctcttcatcgatgagattgacgcg
ctgtgtccaaaacgcagctccagcactggaaccccggagaaccgactcgttgctcagctc
ctcaccctcatggacggagtcggcagcgatgaaggattcgtcattatcggcgccactaac
cgaccagatgccctcgaccctgcgctcagaagaccaggacgcttcgacagagagatagtt
gtaggtgttcccaccctgcagcagaggtaccaggttctgcagtgtgtgtgtcgcagtgtt
cctctctccccgaatgtagatctttactccattgctgagaagacgagtggatacgtgggg
gcggacctgagcgcgctcagtagagaggcagtgctacatgctatactacactctacacag
ggcggagctggagattctggccaatcagaagttgaggagggggacgtgaggatggagcac
tttgtgaaggcgatgcgaatgatcgctccgtcatgcctgaggagcagtgtgggcgtggcc
gagtttacacctgtcaactgggagcgaattggaggactagaggaagtgaaactcaaactt
agacagagtgtggagtggccaatgaagttcccggaggcgtttgtgcgtctgggtgtgtgt
cgagcgcggggtgtgttgctgtacggtccccccggctgtgccaagaccacgctggtgaaa
gcagcagcatcttcatcacactgcagcttcctgtgtgtaagcggagcggagctttactct
ccctatgtcggagactctgagaaagcgcttgctcagctgttccagcaggcacgggcctgt
tcgccctccatcgtcttcctggatgagattgacagcttggtgggttgccgtggagatgga
ggtggttgccgtggcagcagtgtacaggctcaggtgttgtctgtcctgctaaacgagttg
gatggtgtgggctttaaaaccacagagagacgagggacaggactgagtgagagacaggag
acacgccgagaccagcggatgcagctacaggaagtgtgtaatcaggacgtcatgattgtt
gctgccacaaacaggccagacatgttggacagcgctctgcttcgcccgggccgatttgac
cacatcatatacgtccccccacctgacctacaggctcgtctggccatcctgaagctccac
acagagaaaatgccactgaactctaatgtgtgtttggaggatctggcaactcggacaaac
ctgttctctggagcggacctggagaacctctgcaaggaggcggcactgttagctcttcat
gaagaaggtatgagtgtgtccacagtgcagcagaaacacttccagaaggttttacagcat
tttcaaccatcgatcagctcccagcagctcctgcagctccaacagctcttcaaacacaac
tacaattag
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