Silurus meridionalis (southern catfish): 124401347
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Entry
124401347 CDS
T08004
Symbol
srgap1b
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1b
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401347 (srgap1b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
124401347 (srgap1b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124401347 (srgap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
124401347
NCBI-ProteinID:
XP_046729524
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All DBs
Position
18:5805060..5853423
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AA seq
1068 aa
AA seq
DB search
MMSGTMKFKKEKEILTEYESQVKEIRSQLLEQQKCLEQQTEMRVQLLQDLQDFFRKKSEI
ESEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSD
LYLNNVITRLSHVSEDNTRLLKKSKEITFQLQEDLMKILNELYTVMKTYHMYHSETLSSE
NKLKEAERQGERQGRGGEVFSLRNEERHQRRNATRKIQKMKEKRQAKYSENKLKVMKARN
EYLLTLEAANAALFKYYIQDLSHLIDCCDLGYHSSLSRALRTYLSAEYSLETSRHEGLDI
LEGAVESLDPRSDRQRFMETHPTAFTPPARFAFQPHMGDQVSQITAMPQVQAELLLRYQQ
LQSRLSTLKIENEEVKKTSEATLSTIQDMLNMEDYDVSESFQHSRSTESVKSSVSDTYLS
KPSLAKRRANQQETELFYFTKLREYLEGSNLISKLQAKHDLLKRSIAEGYRADIMTTSRR
RNSHSRHQDSAKAIPLIVESCIRYINLYGLQHQGIFRVSGSQVEVNDIKNSFERGNDPLT
DEENNHDINSVAGVLKMYFRNLDNSLFPKEKFNDLIACVRTENLYERALSIRKLLMTSPR
PTLVIMRYLFAFLNHLSQYSDENMMDSGNLAICFGPTLMPTPDLLDQVSCQAHVNEIIKT
IIIHHEAIFPDTKELDGPVYEKCMSSTEYCESPYSEPGVFEEGEQDGSTETQTSEEEGEP
VEALAKFDYIGRSGRELTFKKGASLLLFQRASEDWWEGRCNGTDGLIPHQYITLQDEEAM
SDTLSQKADSEHSSTPTDEVSSRRSLTSPTEPRLPETFISRHRKRTEALLRRAPGHCHGN
GLERSSPPVTVTVTGHFSPRELLRGHSGHQDSPETTRRRAGHNNNNSTNNTTTNGSLSSS
ISRHESLRRDRESPPIRQSPSTLHCSVPEQRTRTLNTHTMAQDIEETMNLALNELRELER
QSGKPDLVLDTLDQMKSSPSLPSGSTPSTLSSPSDSPSPLSPHSPLPPLPGPAARRCPEP
LPSPRMGVMLRPPALRPKPTILPKTNAQPPQQPPTPPQNFPNDKSGTM
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgggcacaatgaagtttaaaaaggagaaggaaatccttacagagtatgagagt
caagtgaaagagatccgctctcagctgttggagcagcagaaatgtctggagcagcagacg
gagatgagagtgcagcttctccaggacctgcaggatttctttcgaaagaagtcggagatt
gagagcgagtactcgcgcaacctggagaagttggccgagcgcttcatggccaaaacacgc
agcaccaaggaccaccagcagtacaagaaggaccaaaacctgctgtcacctgtaaactgc
tggtacctgcttctaaaccaagtgcgcagagaaagcaaggatcacgccacactcagcgac
ctctacctcaacaacgtcattacgcgcctctcgcacgtcagcgaggacaacacgcgcctg
ctcaagaaaagtaaagagatcactttccagttgcaggaggacctgatgaagattcttaat
gaactctatacggtgatgaaaacctaccacatgtaccacagcgagactctgagctcggag
aacaagctgaaggaagccgagcggcagggcgaaaggcagggccggggtggagaagtgttc
agcctgcgcaacgaggagcgccatcagcgccgcaatgccacccgcaaaatccagaagatg
aaggagaagcggcaggccaagtactctgagaataagctgaaggttatgaaagctcgcaac
gaatatctgttgactctggaagctgccaacgctgctctgtttaagtactacatccaggac
ctttcccacttgattgactgctgtgacctgggctaccactccagcctaagccgagcattg
cgcacctacctgtcagccgagtacagcctggagacgtctcgtcatgaaggtctggacatc
ctggagggggcagtagaaagtctggacccccgcagtgaccgccagcgctttatggagact
caccccactgcgttcacaccaccggcacgctttgccttccagcctcatatgggagaccag
gtgagtcagatcacggcgatgccgcaggtgcaggctgaacttctcctccgctatcagcag
ctccagtctcgtctttccacactgaagattgagaacgaggaggtgaagaaaacatcagag
gccaccctgagcaccatccaagacatgctgaacatggaggactatgatgtgtctgagagt
ttccagcacagccgctccactgagtcagtcaagtccagtgtgtccgacacctacctcagc
aaacccagcctggccaaaagacgagccaaccagcaggagaccgagctcttctacttcact
aaactgagggagtacctagaaggcagtaacctcatctccaaactgcaggccaaacacgat
cttctgaagaggagtatagcagagggctacagagcagacataatgaccaccagccgtcgt
cggaactcccacagcaggcaccaggactctgccaaggccattccactgattgtagagagc
tgcatccgctacattaacctctacggtttgcagcaccaaggtattttcagagtgtccggc
tctcaggtggaggtcaacgacatcaaaaattcatttgagagaggaaacgacccgctgacg
gacgaagagaacaaccacgatatcaattctgtggccggcgtgttgaagatgtactttcgt
aacctggacaactcgctgttccccaaagagaagtttaatgacctcatcgcttgcgtccgc
actgagaatctgtacgagcgagcgctgtctatccggaagctcttgatgacatcaccacgg
cccacgcttgtgatcatgagatatctttttgcattcctcaatcatctctcgcagtacagt
gacgagaacatgatggactcggggaacctggccatctgcttcggcccgacgctaatgccc
actccagatctgctggaccaggtctcctgccaagcgcacgtcaacgagatcatcaagacc
atcatcatccaccatgaggctatctttcccgacaccaaagagttggatgggcctgtctac
gagaagtgcatgagcagtacagaatactgtgagagtccatacagtgagccaggagtgttt
gaagaaggagaacaagatggcagcactgaaacgcagactagtgaggaggagggtgagccg
gtggaggccttagcaaagtttgactatatagggcgctcgggtcgtgagctgaccttcaaa
aaaggagcatctctgctgctcttccagagggcttctgaggactggtgggagggacggtgt
aacggcactgacggactcataccacaccagtacatcacactacaggatgaggaggccatg
tcagacactctgagtcagaaagcagacagtgaacacagcagcactcctacagatgaagta
agctccaggaggtccctgacctccccgactgaacccagactgccagaaaccttcatcagc
cgtcataggaagaggaccgaggccctcctgcgccgtgcccccggtcattgccatggtaat
ggtctagagcgcagctcgccgccggtgacggtgacagtgactggtcacttcagtccacgc
gaactgctgcgcggacacagcggacaccaagacagtcctgaaacaacacgtcgccgtgca
ggacacaacaacaacaactcgactaacaacaccaccaccaacggttctctgagctccagc
atcagccgtcacgagtctctgcgcagggacagggaaagtccaccaatccgccagtcccca
tctactctgcactgcagtgtccctgaacagcggacacgcacgcttaacacacacactatg
gcacaggacattgaggagacgatgaacctggcccttaatgagctgcgtgagctggaacgg
cagagcggcaagccagacctggtgcttgacacgctagaccagatgaagagcagcccttcc
cttccgtcaggctccaccccctccaccctttccagcccgtcggattccccgagtccgctg
agtccccacagtcccctgccacctttaccaggcccagcggcccgccgctgccccgaacca
ctcccctctccccgcatgggcgtgatgctccgccccccagccctgcgccccaaacccacc
atcctgccaaaaaccaatgctcagccccctcaacagcccccgactccaccccagaacttc
cccaatgacaaatcaggcaccatgtga
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