Silurus meridionalis (southern catfish): 124402887
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Entry
124402887 CDS
T08004
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04814
Motor proteins
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124402887
04820 Cytoskeleton in muscle cells
124402887
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124402887
04261 Adrenergic signaling in cardiomyocytes
124402887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124402887
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
124402887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
TMF_DNA_bd
CENP-F_leu_zip
DUF3450
DUF745
HrpB7
Crescentin
NPV_P10
XhlA
DUF1664
CLZ
DUF16
CALCOCO1
ERM_helical
EzrA
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
124402887
NCBI-ProteinID:
XP_046732211
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All DBs
Position
20:16223063..16234902
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AA seq
248 aa
AA seq
DB search
MAGVNSVEAVKRKIKVLQQQADEAEERAEVLQRQVEEEKRCKEQAEADVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEGQLKEAKHIAE
EADRKYEEVARKLIIIEGDLERTEERAEVAEAKCAELEEELRNVTNTLKSLEAQAEKYSH
KEDKYEEEIKILTDKLKEAETRAEFGERSVTKLEKTIDDLEERLAAAKEENIKIHATLDA
TLQDLNNF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgaacagcgtggaagcggtgaagcgcaagattaaagttctccagcaacag
gcggatgaagccgaggagagagccgaggtcctgcagaggcaggttgaagaggagaagcgc
tgcaaggagcaggctgaggcggacgtcgcttctctgaacaggcgcatccagctggtcgag
gaggaattggatcgagctcaggagagactcgcgacggctttacagaaactggaggaggca
gagaaggctgcagacgagagtgagaggggcatgaaggtgattgagaacagggccctgaaa
gatgaggaaaagatggagctgcaggagggccagctgaaagaggctaagcacattgcagag
gaagctgaccgcaaatacgaggaggtggctcgtaagcttatcatcatcgagggtgatttg
gagcgcacagaggagcgagcagaagttgctgaggccaaatgtgcggaattggaggaggag
ctgagaaatgtcaccaataccttaaagtccttggaggcccaagctgagaagtattcccat
aaagaggacaagtacgaggaagagatcaagattctcacggataagctgaaggaggctgag
actcgtgctgaatttggtgaacgatcagttaccaaacttgagaaaacaatcgacgatttg
gaagagaggctcgctgcagctaaagaggagaacatcaagatccacgccacgctggacgcc
actctgcaagatctcaacaacttctaa
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integrated database retrieval system