KEGG   Silurus meridionalis (southern catfish): 124402887
Entry
124402887         CDS       T08004                                 
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
  KO
K09290  tropomyosin 3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04260  Cardiac muscle contraction
smeo04261  Adrenergic signaling in cardiomyocytes
smeo04814  Motor proteins
smeo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    124402887
   04820 Cytoskeleton in muscle cells
    124402887
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    124402887
   04261 Adrenergic signaling in cardiomyocytes
    124402887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124402887
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     124402887
SSDB
Motif
Pfam: Tropomyosin Laminin_II TMF_DNA_bd CENP-F_leu_zip DUF3450 DUF745 HrpB7 Crescentin NPV_P10 XhlA DUF1664 CLZ DUF16 CALCOCO1 ERM_helical EzrA Nuf2_DHR10-like
Other DBs
NCBI-GeneID: 124402887
NCBI-ProteinID: XP_046732211
LinkDB
Position
20:16223063..16234902
AA seq 248 aa
MAGVNSVEAVKRKIKVLQQQADEAEERAEVLQRQVEEEKRCKEQAEADVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEGQLKEAKHIAE
EADRKYEEVARKLIIIEGDLERTEERAEVAEAKCAELEEELRNVTNTLKSLEAQAEKYSH
KEDKYEEEIKILTDKLKEAETRAEFGERSVTKLEKTIDDLEERLAAAKEENIKIHATLDA
TLQDLNNF
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccggagtgaacagcgtggaagcggtgaagcgcaagattaaagttctccagcaacag
gcggatgaagccgaggagagagccgaggtcctgcagaggcaggttgaagaggagaagcgc
tgcaaggagcaggctgaggcggacgtcgcttctctgaacaggcgcatccagctggtcgag
gaggaattggatcgagctcaggagagactcgcgacggctttacagaaactggaggaggca
gagaaggctgcagacgagagtgagaggggcatgaaggtgattgagaacagggccctgaaa
gatgaggaaaagatggagctgcaggagggccagctgaaagaggctaagcacattgcagag
gaagctgaccgcaaatacgaggaggtggctcgtaagcttatcatcatcgagggtgatttg
gagcgcacagaggagcgagcagaagttgctgaggccaaatgtgcggaattggaggaggag
ctgagaaatgtcaccaataccttaaagtccttggaggcccaagctgagaagtattcccat
aaagaggacaagtacgaggaagagatcaagattctcacggataagctgaaggaggctgag
actcgtgctgaatttggtgaacgatcagttaccaaacttgagaaaacaatcgacgatttg
gaagagaggctcgctgcagctaaagaggagaacatcaagatccacgccacgctggacgcc
actctgcaagatctcaacaacttctaa

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