Silurus meridionalis (southern catfish): 124402994
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Entry
124402994 CDS
T08004
Symbol
gad3
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00250
Alanine, aspartate and glutamate metabolism
smeo00410
beta-Alanine metabolism
smeo00430
Taurine and hypotaurine metabolism
smeo00650
Butanoate metabolism
smeo01100
Metabolic pathways
Module
smeo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
124402994 (gad3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
124402994 (gad3)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
124402994 (gad3)
00430 Taurine and hypotaurine metabolism
124402994 (gad3)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
124402994 (gad3)
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
124402994
NCBI-ProteinID:
XP_046732461
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Position
20:18881885..18904694
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AA seq
562 aa
AA seq
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MKPRTLWMQSTSCFICSSIPGPTLLKQMEIRRDMSELLSWSKQDGDPFKSTEQGDGGCST
NDFSIVHGKDLLPAENGEELTKHFLQELLNILLAYIRKSMNRSSKVLDFHHPHQLKEGLE
GFSLELPEKPDNLEQLLVDCRNTLKYGVKTAHPRFLNQLSSGLDIIGLAGEWLTSTANTN
IFTFEVAPVFILMEEVILKKMQSIIGWSEEEGDGIFCPGGTISNLYSILLARYHYFPKVK
TEGMQALPRLALFTSTHSHYSIKKSAAVLGIGTDSVIAVNCDERGKMIPAELESSIMAAK
AKGLVPFYVNATAGTTVYGAFDPFTDVANICEKWNLWMHIDAAWGGGLLLSKKHKIRLQG
IEKASSVTWNPHKMMGAPLQCSTILVRQKGLLEACNKQCAEYLFQSDKPYDMSYDTGDKT
IQCGRHVDVFKLWLMWKAKGSEGFESQINHCLENAEYLYYKLKSRQDFQLVFQSKPEHSN
VCFWYMPSRVRNMSTGPDRDRELHSITPKIKAKLMEKGTAMIGYQPLGEKPNFFRCVFSN
PATLKQDVDFLLDEIASLGSGL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaggacattgtggatgcagtcgacatcctgcttcatctgcagctcgatacct
ggacccactttattaaagcagatggaaatcagacgggatatgagtgaactcctgagctgg
agcaagcaggatggagatcccttcaaaagcacagagcagggggacggaggctgcagcacc
aatgacttcagcatcgtccacggcaaagatctccttcctgctgagaacggtgaggagctg
accaaacatttcctccaggagctgctaaacatccttctggcatacatccgcaagtctatg
aatcgcagctccaaagtgctggacttccaccatccacaccagttgaaggaaggactggaa
ggcttcagcctggagctgccagagaaaccagacaatctcgagcagctgttggttgactgc
aggaacacgttaaaatatggagttaaaacagctcacccacggttcctcaaccagctctca
agtggactggacatcattggactagcaggagaatggctcacttctactgcaaacacaaac
atcttcacctttgaggttgctcctgtgtttattctgatggaggaagtcattctgaagaaa
atgcagtccatcatcggttggtctgaagaggaaggagatggaatcttctgcccaggtgga
acaatttcgaatctctacagcatcctactggcccgttatcactacttcccaaaggtgaag
actgaaggcatgcaggcgttacctcgcctcgccctcttcacctccacacatagtcattat
tcgatcaagaagtcagcagcggttctcgggatcggcaccgacagcgtcatcgcggtgaat
tgtgatgaaaggggcaaaatgattccagcagaactggaatccagcatcatggcagcaaaa
gctaagggtttggttccattctacgtgaacgctacagcaggaactacggtctacggggcc
ttcgatccgttcacagacgtcgcaaacatctgtgaaaaatggaacttgtggatgcatatc
gatgccgcatggggaggaggattactgctgtccaagaagcacaagatcagactgcaggga
attgagaaagcttcttctgtcacctggaaccctcacaagatgatgggcgccccgctgcaa
tgttccaccattctggtgcggcagaagggtctgctggaggcttgtaataagcaatgtgcc
gagtatctcttccaaagtgacaagccgtacgacatgtcttacgacaccggagacaagacc
atccagtgtgggaggcacgtggacgtcttcaagctctggctcatgtggaaggctaagggt
tcagaaggttttgaatcgcagattaaccactgcctggagaacgctgagtatctttactac
aagctgaagagcagacaagattttcagttggtcttccaaagcaaacctgaacacagtaac
gtgtgcttctggtacatgccaagccgagtgaggaacatgtccacaggccctgacagagac
agagaacttcattcgatcactccaaagatcaaagccaagctgatggagaaaggcacggcc
atgatcggctaccagcctcttggagaaaagcccaacttcttccgctgtgttttctccaac
ccggccacgctgaagcaggacgtggacttcctgctggatgagatcgcgagtctcggctct
gggctttaa
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