Silurus meridionalis (southern catfish): 124403064
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Entry
124403064 CDS
T08004
Symbol
nectin4b
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
smeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124403064 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124403064 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124403064 (nectin4b)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Nectin family
124403064 (nectin4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
TMEM154
LapA_dom
EphA2_TM
Protocadherin
EzrA
DUF6377
RseA_N
PAS_12
Lectin_N
Motif
Other DBs
NCBI-GeneID:
124403064
NCBI-ProteinID:
XP_046732598
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Position
20:complement(5172920..5185137)
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AA seq
571 aa
AA seq
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MEKMSNPTCFALLLMAVIAHVCGEFIQPPPFLALRSFAGEETRLPCEFKPQDGDRVIQVT
WSTEKNNGVKEQIITRHMTEGLQEFPNFAGRVRFASSDPIKESTLLILNTKESDQATYTC
HISTFPSGNFERQIIITVWRIPISTLEPVILQEGQSFKVAATCRAIGLPPPRLSWDTDVP
GQIQNRSSEDRVITSQYFLHPLRSMNGRKLDCLVWHPALAQPHRLSNLLVVHFPPDAVIS
GYDQNWSINRQGAELKCEGVGNPQPHNFTWTRKGGSLPKEVSLEGNRLIFTRPLNKTDEG
VYECEARNTVGSVKAEVNIQISVNEASRLEASFNNLLLIIVGGAAGAVIVVMTIIILMVT
CHHKRRTRKLKRELSEKKDEINNLSRQTSMRRLNSVSTDPRIQTEESTLIGMDSPIKSSV
FSLEENSIICERRDGYKEVDYDSLGRPAIYPSYHAERASMRRKESEVEKQDRAQRVASFI
KNSNMTLDVDFCRDQTPPPLSVCSGTSRDGGTEKDLWGQREGMPEGEEGDCTSGSHQLSE
ALQNHFHYSNGFLRPKPHPNSILLHPHSQVI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgtcaaacccaacctgctttgccctgttactgatggcagtaattgcccat
gtgtgtggagagtttattcagcctcctccgttcctggcgttgcgctcctttgccggagag
gagactcgactgccgtgcgagtttaagccccaggacggtgatcgggtgatacaagtgact
tggtctacagaaaagaataacggtgtcaaggagcagatcatcaccagacacatgacagag
gggcttcaagagtttcctaactttgcgggccgtgtgcgcttcgcaagttctgacccgatt
aaagagtcgacgctgttgattctaaacacgaaggagtcggatcaagccacgtacacctgc
catatctccacttttccttcagggaacttcgagagacaaatcatcattactgtttggagg
attcccatctcaacactggaaccagtcatcctgcaggagggtcagtcattcaaagtggct
gccacctgccgtgccattggcctgcctccaccaaggctctcctgggacacagatgtcccc
gggcaaatacagaacaggagttcagaggacagggtcatcacttctcagtacttcctgcat
cctctacgcagcatgaacggccgcaaactggactgtctggtgtggcaccctgctctagcg
caaccccataggctgagcaacctacttgtcgtacactttcctcctgatgctgtgatttct
ggttatgatcagaactggtcaattaatcgacagggtgctgagctcaagtgtgagggtgta
ggaaatcctcaaccacacaacttcacctggaccaggaagggtgggtctttgcccaaggaa
gtgtctttggagggaaacaggctcatttttacacgtcccctaaataaaacagatgaagga
gtatatgaatgtgaggccagaaacacagtgggatctgtgaaggcagaggttaatattcag
atctcagttaatgaagcgtcccggctcgaggcctctttcaacaacctccttctgatcata
gtgggtggagctgctggggcagtaatagttgtcatgacaattatcatcttaatggttacc
tgtcatcataaacgcaggaccaggaaacttaaaagggagctcagtgaaaagaaggatgag
atcaataacctttctagacagacctctatgaggagacttaactcagtcagtactgacccc
aggatacagactgaagaatccacactaatcgggatggactctcctataaaatccagtgtc
ttttcactagaggagaattctatcatatgtgagcggagagatgggtacaaagaagtcgac
tatgacagcctcggccgtccagccatctacccgtcttaccacgcagagcgagcgagcatg
aggaggaaagagtccgaggtggagaaacaggaccgtgctcagagagtggcaagctttata
aagaacagtaatatgactttggatgtagatttttgcagggaccagactcctccacctttg
tctgtttgctcaggcacttcaagagacggagggacagaaaaagacttatggggacagaga
gaaggcatgccggagggtgaggagggagactgcacctcaggctcgcatcagctttcagaa
gcactccagaaccacttccattacagcaatggtttcctcaggccaaaaccccacccaaat
tctatactacttcacccacattcccaggtcatataa
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