Silurus meridionalis (southern catfish): 124403302
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Entry
124403302 CDS
T08004
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03020
RNA polymerase
smeo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124403302 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124403302 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124403302 (polr1c)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124403302 (polr1c)
RNA polymerase I system
RNA polymerase I
124403302 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
124403302
NCBI-ProteinID:
XP_046732940
LinkDB
All DBs
Position
2:16259026..16262935
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AA seq
348 aa
AA seq
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MAVPMRNVDEIRDRVILGEFGVKNVHSTDFPGNYPGYDDTWDLKRFKKNFRLDIVHLDEN
TLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVFIYNNTSIIQDEILAHRLGLVPIKVDP
RLFEYRNPGDEEGTEIDTIQLQLKIKCSRNPRASKDASDPKELYLNHMVYSKDMKWVPIG
NQADVFADANIGPVHEDILLAQLRPGQELDIVMHCVKGIGKDHAKFSPVATASYRLLPEI
TLLQTIEGEKAERLKRCFSPGVIELEDVDGKQVAKVVNSRLDTCSREVLRHDDLKNLVKL
GRVRDHFIFSVESTGILPPDVLVSEAINVLTAKCQRFLSELDSVTEME
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacctatgagaaacgtggatgagatccgcgatagagtgattttgggcgaattc
ggagttaaaaatgttcattctacagattttcctggtaattatcctggttatgatgacaca
tgggacctcaagaggttcaaaaagaatttcaggctcgatattgttcatctggatgagaac
acgctggagtttgatatggtgggaattgacgctgccattgcgaacgctttcagacggatt
ttactagctgaggtcccaactatggcagttgaaaaagttttcatttacaacaatacatca
ataattcaagatgaaatcctagcacatagacttggcttggtccccattaaagttgatcct
cgtctttttgagtacagaaatcctggtgatgaggaaggcactgaaattgacacaattcag
cttcagttgaagatcaaatgctcaaggaatcccagggcttctaaagatgcatctgatccc
aaagaactatacctcaatcacatggtgtattcaaaggacatgaagtgggtacctatcgga
aaccaggctgatgtgtttgctgatgctaacattggtcctgtccatgaagacatcctcttg
gcacagcttcggccaggacaagagctggatatagtcatgcattgcgttaaaggaataggt
aaggaccatgccaagttttccccagtggccactgctagttataggctacttcctgagatc
acgttactgcagacgattgaaggagaaaaagctgagagattaaagcgctgcttctcacct
ggagttattgaattagaggatgttgatggaaaacaagtggctaaggtggtcaacagtcgt
cttgatacatgcagcagagaagtgcttagacacgatgacctaaagaacttggtaaaactc
ggaagagtgcgggaccattttatattctcagtggagtctactggaatcttaccacctgat
gtcttggtcagtgaggcaattaatgtactaactgcaaagtgccagagatttctgtctgag
ctcgattcagtgactgaaatggaatag
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