Silurus meridionalis (southern catfish): 124403603
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Entry
124403603 CDS
T08004
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124403603 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124403603 (chrnd)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124403603 (chrnd)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
124403603
NCBI-ProteinID:
XP_046733231
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Position
21:675057..681480
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AA seq
519 aa
AA seq
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MKSIFYLPPVLLTFILSGCSGRNEEERLIKHLMKGYNKELRPVQNKDETVPIYLSLTLSN
LISLDEVSETLLTNVWMDHGWTDPRLAWNESEFDDISIVRLPSRMVWLPEIVLENNNDAQ
FEVAYYCNVLVYPSGFVYWLPPAIFRSSCSINVYYFPFDWQNCSLKFSSLTYNAKEISLN
LKEDMDEETQKMFPMEWIVIDPAEFKENGEWEIVHRPARRNIYKHIPLDSNKHQDITFYL
IIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQRLP
ETSMAVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMSEWTKEFFLEKLPRFLH
MSRPAESELQWEGALTRRSSSVGYIAKAEEYYSVKSRSELMFEKQSQRHGLTTRPTPTAV
FNSSNESDVTDQLFNELKPAVEGANYIVKHMRDKNDYSEEKDNWSGIARTVDRLCFYIVT
PIMTIGTIFIFLMGNYNHPPPLPFEGDSFTYREEDRRFI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctattttttatttgcctccagttttgctcactttcattctgtcaggatgcagc
ggcaggaacgaggaggaacgtctcatcaaacacctgatgaagggatacaacaaagaactg
cgtccagtgcaaaataaagatgagacggtgccgatctatctctcactgacgctctccaac
ctcatctctctggacgaagtcagtgagactttactgaccaatgtgtggatggatcacggc
tggaccgaccccagacttgcatggaacgagtccgagtttgatgacatctctatcgttcgt
ctgccttcccgcatggtttggcttcccgagatcgtgttggagaacaataatgatgcccag
ttcgaagtggcgtattactgtaacgtgttggtgtatcccagtggctttgtgtactggctt
cctcctgccatcttccgtagttcttgttccatcaacgtctactattttcctttcgactgg
caaaactgcagcctaaagttcagctctttaacctacaatgccaaagagatcagcttgaat
ttaaaagaagatatggatgaggaaacgcagaagatgttccccatggagtggatcgtcatc
gaccctgcagaattcaaagagaatggtgagtgggagattgttcacagacctgccaggaga
aacatctacaagcacatccctttggacagcaacaagcaccaggacatcaccttctacctc
atcatcaaacgcaagcctctgttttacatcgtcaacatcatcatcccctgtgtgctgatc
tccttcctggcctcgctggtgtactacctgcctgcagacagtggtgagaaaatgacgctg
tccatctcagtactcttggcccagtctgtattcctgctcctgatatcgcagcgtttaccc
gagacctccatggctgttccgctgatcgttaagtacctgatgttcatcatggtcttggtc
actgtggtggtgttgaactgtgttgtcgtgttgaacctccacttcaggacccccagcaca
catgtcatgtctgagtggaccaaagagttcttcctggagaagcttcctcgtttcctccac
atgtcccgtccggctgagagcgagctgcagtgggagggagctttgaccagacgctccagt
tctgtgggttacattgccaaagccgaggaatattacagcgtcaagtcccgaagtgaactg
atgttcgagaagcagtcgcagagacacggcctgacaaccaggcccacgcccaccgctgtg
tttaactctagcaacgagtccgacgtgaccgatcagctgtttaacgagctgaagccggct
gtggaaggagcgaactacatcgtcaagcacatgcgagacaaaaacgactatagcgaggag
aaggataactggagtggaattgccaggacggtggaccgcctctgtttctacatcgtgact
cccatcatgaccattggaaccattttcatcttcctgatgggaaactacaaccatcctcct
cctcttccgttcgagggagactcgttcacttacagagaggaagaccgacgctttatatga
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