Silurus meridionalis (southern catfish): 124403817
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Entry
124403817 CDS
T08004
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124403817 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124403817 (pola1)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124403817 (pola1)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
124403817 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
124403817
NCBI-ProteinID:
XP_046733552
LinkDB
All DBs
Position
21:1131754..1176394
Genome browser
AA seq
1474 aa
AA seq
DB search
MAPVSNPDKDADGGDLDDGATCGLAASRSRREKKEKAGRKSALEQLKKAKKGEKVKYEVK
EIESVYEEVDEDQYSRMVRERQDDDWIIDDGTGYVEDGREIFDEDLENTASDKSAKNNSG
AKGIEGRNGKRSSVTKPNSIKSMFMNSNVKKPAEKNVDLSKDDLLGDILEDLHSEKSVLL
TPPPVITLKKKKALGSPMNPFSVQTQTPKESPVAPASKPKHAVIRPPPSDLALKPASKPE
SKPASSIHPQKPKVEEHEEACDSLDFDEVDFDEPMELENEQQEETQVKAETKTETTPGVK
IEPKTEPADEVLISGMVGGSCWEKMEKTEVDESPMEVQVDSSQLPMVEGADGEMVLRFYW
LDAFEDQFNQPGVVYLFGKVWIESAKAHVSCCVAVKNIERTMHFFPRERKVNLATGEETD
IPVGMMDVYQEFNSLSEKYKIMKFKSKKVEKNYAFEIPDVPSQCEYLEVRYSAEMPQLPS
DLKGSTFSHVFGTNTSSLEHFLLSRKIRGPCWLDIKTPQLCSQPMSWCKVEAIALKSDLI
SVMKDLPPPPLVVMSISLKTVPNPKTHHNEIVSLAALIHYKFPLDKAPPRVPYQDHFCVV
NKPTDCIYPYDFKDAVKKKNGIVEIAATERTLLGFFLAKLHKIDPDVLVGHDILGFDLEV
LLQRINTCKVPFWSKIGRLRRANMPKLGGRGRFAEKSAACGRLVCDVEISAKELIRCKSY
HLTELAAQILKADRAVVPTENIRNFYSDSPHLLYLLELTWMDAKLILQIMCELNVLPLAL
QITNIAGNVLSRTLMGGRSERNEYLLLHAFHEKNYIVPDKQFMKKPQHEPGEDDDVDAGK
SKSGTVRKKAAYAGGLVLEPKIGFYDKFILLLDFNSLYPSIIQEFNICFTTVQREASSSR
KKTEDEGADEIPELPDPDLEMGILPREIRKLVERRRQVKQLMKQPDLNSDLYLQYDIRQK
ALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLDVIYGDTDSIM
INTNSSNLDEVFKLGNKVKNEVNKLYRLLELDIDGVFKSLLLLKKKKYAALMVEPQGEGR
YTTKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDTILENIQQHLMEVGEKVAQGS
VPLTMFEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYIICQDGSNLA
ASQRAYAPEQLQKQPGLNLDTQYYLSQQVHPVVGRICEPIEGIDAVLIASWLGLDPGQFR
AQQRQQREEESDGFLGVPAQLTDEERYRDCERFSFTCPECGTENIYDSVFEGTGNVMEPG
LLRCCHVPCNASPLHHTVQISNKLLLDIRRHVRKYCSGWLQCEDQACGTRTRRLPVAFSR
SGPICPVCCKSTLKPEYSEKALYNQLSFYRFIFDWEHATTKLLQGEEKTKFRKLFHEEKE
VYKKLKMVVDRVLASSSYSEVNLAKLFQAFTSLK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtttctaatccggataaagatgcagacggcggggatctcgatgatggagcc
acatgtggtctcgctgcatctcgctcgagacgagaaaagaaagagaaagcgggccgtaaa
tctgccttggagcagctcaaaaaagccaagaagggagaaaaggtgaaatacgaggtgaag
gagatcgagagtgtgtacgaggaggtggacgaggatcagtactcacggatggtccgggag
agacaggacgatgactggatcatcgatgatggaacaggttatgtagaagatggcagggag
atctttgatgaagatctggagaatacagcttcggataaaagcgctaaaaacaactccggt
gctaaaggcatagaaggtaggaacggcaagagatcatctgtgactaaacccaacagcatc
aagagcatgttcatgaacagcaatgtgaaaaaacctgccgagaaaaatgtagacctgtct
aaagatgatctgctgggagacattttggaggatctgcactccgagaaatcggttcttctc
actccacctcctgtcatcaccctgaagaaaaagaaagccctggggtcacccatgaaccct
ttctccgtccaaacacaaacccccaaggagtcacctgtagctccggcgtcaaagcccaag
catgctgtgattcgcccgcctccgtctgatctcgcacttaaacctgcgtctaaacccgag
tctaaacctgcctcgtccatccacccccagaaaccaaaagtagaggaacatgaggaagcg
tgcgactcgttagattttgacgaggtggactttgatgagccgatggagctggagaacgag
cagcaggaggaaacgcaggttaaagccgagactaagaccgagacgacgcccggtgttaaa
atagaaccaaaaaccgaaccggcagatgaggtgttgatatcaggcatggtgggtggctcc
tgctgggagaagatggagaagacggaggttgatgaatctcccatggaggtgcaggtggac
tccagtcagctgccgatggtggaaggagccgatggagaaatggtgttgcgcttttattgg
ctggatgctttcgaggatcagttcaaccaaccaggtgtggtgtacctgttcgggaaggtg
tggatcgagtcggctaaagcccacgtcagctgctgtgtggccgtgaaaaacatcgagagg
accatgcacttctttccgagagaacgcaaggtaaacctggcgacaggtgaggagacggac
attcctgttgggatgatggacgtctaccaggagtttaacagcctctcggagaaatacaaa
ataatgaagttcaaatccaagaaagtggagaagaactacgcgttcgagattcctgacgta
ccgtcacagtgcgagtacctggaagtgcgatactccgctgagatgccccagcttccgtcc
gatctcaaaggctccaccttctcgcatgtgtttggtacgaatacctccagcttggagcac
ttcctcctcagcaggaagatacgaggaccctgctggcttgacatcaagacccctcagctg
tgcagtcagccaatgagttggtgtaaagtggaggccattgctctgaaaagtgacctgatc
tccgtgatgaaggacctacctccgcctcctcttgtcgtcatgtccatcagcctgaagacg
gttcccaatcccaagacccaccacaacgagatcgtgtctctggctgctctgattcattac
aagtttcctctggacaaggcgcctccacgcgtcccttatcaggaccatttctgtgtggtg
aacaaacctacagactgtatttacccctacgacttcaaggacgcagttaaaaagaagaat
gggattgtcgagatcgcagcgacagaacgaactcttctgggcttcttcttggccaaatta
cacaagatcgatcctgacgttttggtgggtcacgatatcttgggttttgacctggaagtg
cttcttcagagaatcaatacatgcaaggtgcctttctggtccaagatcgggcgactgagg
cgggccaacatgcccaaactcgggggccgaggccggtttgcggagaagagcgccgcctgt
ggccggctcgtgtgcgacgtcgagatctctgctaaggagctcattcggtgtaagagttac
cacctgactgagctggcggcacagatcctgaaggccgaccgagccgtggtgcctacagag
aacatcaggaacttctacagtgactctcctcacctgctgtaccttttggaactcacctgg
atggatgccaagctcattttgcagatcatgtgtgagctgaatgtgcttcctctggcactt
cagatcaccaacatcgccggaaacgtcctgtctcggacgctgatgggcggacgctcagag
aggaacgagtacctgctgcttcatgccttccacgagaagaactacattgttccagacaag
cagtttatgaagaaacctcagcacgagcctggtgaggatgatgatgtagatgcaggcaag
agcaagtctggaacagtgaggaagaaggctgcatatgctggaggtctggtgctggaacct
aaaattggtttttatgataagttcattctgctgctggacttcaacagtctgtacccctcc
atcattcaggagtttaacatctgtttcactacagttcagcgggaggcatccagctcccgt
aaaaagactgaggacgagggtgctgacgagattccagagcttcccgacccagatctggag
atgggcattcttccgagggagatccgtaagctggtggagcgcagacggcaggtcaaacag
ctgatgaagcagccggatctgaactctgacctttacctgcagtatgatatcagacagaaa
gctctgaaactcaccgctaacagcatgtacggctgtctgggcttctcctacagtcgcttc
tatgccaaacctctggctgctctcgtcacacacaaaggcagagagatcctgatgcacacc
aaagacatggttcagaagatgaacttagatgtgatttatggagacaccgactccatcatg
atcaacaccaacagctccaacctggacgaggtcttcaaactgggcaacaaggtgaagaac
gaagtgaataaactgtaccgtctgctggagctcgatattgacggtgtgtttaagtccctg
ctgctgctgaagaagaagaaatacgctgctctgatggtggagccacagggagaaggtcga
tataccaccaagcaggagctgaaaggcctggacatcgtgcgtagggactggtgcgacctc
gccaaggagtgcggcaactacgtgattggacagattttgtctgaccagaaccgggacacc
attctggagaacatccagcagcatctgatggaggttggtgaaaaggtggcccaaggcagc
gtccctctcaccatgttcgagatccacaaggccctgacgaaggaccctcaggactaccct
gataagaagagtctccctcatgttcatgtggctctgtggatcaactctcaaggaggacgc
aaggtcaaagccggagacaccgtgtcctacatcatctgccaggatggttcaaacctggca
gccagccagagggcgtacgctccagagcagctccagaagcagccgggtctgaacctggac
acgcagtactacctctcgcagcaggtccaccccgtggtgggacgcatctgtgagcccatc
gaggggatcgacgccgtcctgatcgcctcatggctggggttggaccctgggcagttcagg
gctcagcagaggcagcaacgtgaggaggagtcagacgggttccttggagtcccggctcag
ctgacagatgaagaacgttaccgggactgtgagaggttctccttcacctgccccgagtgt
ggaacggaaaacatctatgacagcgtgttcgaggggacggggaatgtcatggaaccaggt
ctgctgcgttgctgtcacgtcccctgtaatgcgagcccactacatcacaccgttcaaatc
agcaacaagctgctcctggacatccggagacacgtccgcaaatactgcagcggatggctg
cagtgtgaggaccaggcatgtggaacccggacacgtcgtctccctgttgcgttctcgcgt
tcaggaccgatctgtcccgtctgctgcaagtccacgctcaaacccgagtattcggagaag
gcgctctacaaccagctgagcttctacaggttcatcttcgactgggagcacgccaccacc
aagctcctgcagggggaagagaaaacgaaattcaggaaactctttcacgaagagaaggaa
gtgtataagaagctgaagatggtggtggaccgtgtcctggcgtccagcagctactccgag
gtcaacctcgccaaactcttccaggcttttacgtctttaaagtaa
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integrated database retrieval system
