Shewanella mesophila: K0I73_00590
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Entry
K0I73_00590 CDS
T09171
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smes03016
]
K0I73_00590 (trmA)
Enzymes [BR:
smes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K0I73_00590 (trmA)
Transfer RNA biogenesis [BR:
smes03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K0I73_00590 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_15
MTS
Methyltransf_11
Methyltransf_31
PrmA
Cons_hypoth95
Methyltransf_12
TRM
DREV
Motif
Other DBs
NCBI-ProteinID:
QYJ86311
LinkDB
All DBs
Position
complement(125490..126587)
Genome browser
AA seq
365 aa
AA seq
DB search
MNLEAMDPSQYDKQLDAKREKLAQLFADFNTPSLEVFASEPEHYRMRAEFRVWHEGEDLY
YYMFDKVLNQKVRCEQFLPASALINQMMPALMAELRPNTILRHKLFQVDFLSTLSGEILV
SLLYHKQLDQQWQDEVQALKQCLGELFKVNIIGRARKQKLVMDRDYVIESLPVSGQTLTY
KQIENSFTQPNGKVSIKMLEWAIDITQQSTGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDSAQYNIEANNIDNLQIIRMSAEDFTDALAKKRSFRRLEGVDLDSYNCNTIFVDPP
RAGLDDNTLAMVQGYERIIYISCNPNTLMDNLSVLDKTHKITRFALFDQFPYTDHMESGV
LLEKR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagcaatggatcctagccaatacgataagcaacttgatgctaaacgtgaa
aaattagcgcaactatttgctgactttaacactccatcattggaagtattcgcttcagaa
ccagagcattatcgtatgcgcgctgagtttagagtctggcatgaaggcgaagacctttac
tactatatgttcgataaggttcttaatcaaaaagtacgttgcgaacaattcttacccgcc
agcgcattgattaatcaaatgatgccagccctaatggctgaacttcgccccaacacgata
ttacgccataagctattccaggtggattttttatcgaccctaagcggtgaaatcctcgta
tcattgttataccacaagcaattagatcaacagtggcaagatgaagtgcaagccctcaag
caatgtctgggtgagctattcaaggtcaatatcattggccgtgctcgtaaacaaaaatta
gttatggatagggattatgttattgagtccttgccagtcagtggccaaacgctaacctat
aaacagatagaaaatagctttactcagcctaatggcaaggtttctatcaagatgcttgaa
tgggcaatcgatatcacccaacagagcactggagatctactggagctttattgtggtaac
ggtaacttctctattgcgctagcgcaaaacttcaatcgcgtattagccaccgagcttgct
aagccatctgtagactcggcgcaatacaacattgaagctaataacatcgacaacttacag
atcattcgtatgtctgccgaggattttaccgatgcgctagcgaaaaaacgtagttttaga
cgcttagaaggtgtcgatttagatagctacaactgcaataccatctttgtcgacccaccg
cgtgcgggcctcgatgacaacaccttggctatggttcaaggttatgaacgcattatctat
atttcgtgtaatcctaataccttaatggacaacttaagcgtattagataaaacacataaa
attacccgcttcgccctgttcgaccaattcccatataccgatcatatggaatcaggtgtg
ttattagaaaaacgctaa
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