Shewanella mesophila: K0I73_05565
Help
Entry
K0I73_05565 CDS
T09171
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
smes
Shewanella mesophila
Pathway
smes00730
Thiamine metabolism
smes01100
Metabolic pathways
smes01240
Biosynthesis of cofactors
smes04122
Sulfur relay system
Module
smes_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K0I73_05565 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
K0I73_05565 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smes03016
]
K0I73_05565 (thiI)
Enzymes [BR:
smes01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
K0I73_05565 (thiI)
Transfer RNA biogenesis [BR:
smes03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K0I73_05565 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
QYJ87183
LinkDB
All DBs
Position
1243475..1244929
Genome browser
AA seq
484 aa
AA seq
DB search
MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLRKVDDDAKVQRQWDKIMVKVPADKPE
MVAIYAERLACIPGIAHVLQVKESTFESIDDIYQQTLPLYKEQLAGKTFCVRVKRSGQHD
FNSIEVERYVGGGLNQFTDAAGVRLKNPDMTINLEIDRDNLYLVEKRIDGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FVSVPFDPVVSEILEKIDNGQMGVILKRMMMRAATRVADKMGIQALVTGEAMGQVSSQTL
TNLNVIDRCTEMLILRPLIVMDKQDIINISRQIGTEDFAKSIPEYCGVISQKPTVKAVLS
KIEAEEAKFSEDLLDRVIQAAEIIDIREIATSMDTKITETETVDTVNGGEVVVDIRAPEE
EEQSPLAIEGVEIKAIPFFKLATKFADLDKDKTYLLYCDRGVMSKLQALYLQEQGYHNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactgtttcctgaaatcatgatgaaaagcaaaccggtaagaatg
cgttttaccaagatgcttgaaacaaacattcgtaatgtgctgcgaaaagtcgacgacgat
gcgaaagtgcagcgtcagtgggacaagatcatggtcaaggtgccagccgataagcccgag
atggtggctatttatgccgagcgtctagcctgtattccggggattgctcatgtgctgcaa
gttaaagaaagcacatttgaatcgatcgatgatatttatcaacagaccttacctctatat
aaagagcaacttgcgggcaaaacgttttgtgttcgagtgaaacgtagcggtcaacatgac
tttaattcaattgaagttgaacgttatgtcggtggtggtttgaatcaatttaccgatgct
gcaggcgttagacttaaaaaccctgatatgacaattaacttagagatcgatagagacaat
ctttatttggttgaaaagcgtatcgatgggcttggtggattcccgatggccacccaggaa
gatgtgttgtcgctgatttctggtgggttcgactcaggtgtttcaagttaccaatttatc
aagcgcggctctcggactcattactgcttcttcaatcttggaggcgatcaacatgagata
ggtgttaagcaggttgcttatcatctttggcaaaaatatggtgagtctcacaaggttaag
tttgtttcggttccctttgatcctgtggttagcgaaattttagagaaaatcgataatggc
caaatgggcgtcatactaaaacgtatgatgatgcgtgcagctacccgcgtcgccgataaa
atgggtattcaagcgttagtgactggtgaggcgatgggccaggtatcgagtcagacactg
actaacttgaatgtgatagaccgttgcaccgagatgttgattctgcgtccgcttatcgtg
atggacaagcaagatattatcaatattagtcgtcagatcggtaccgaagattttgcgaaa
tctatccctgaatactgcggcgtgatctcgcaaaagccgacggtaaaagcggtactctct
aaaattgaagccgaagaggctaagttctctgaagacttattagatagagttatccaagct
gcggaaattatcgatattagggagattgccactagcatggatactaaaatcaccgaaact
gagactgtcgataccgttaatggtggggaagtggttgttgatattcgcgcaccagaagag
gaagaacaaagtcctctcgctatcgagggtgttgaaattaaagccattcctttctttaag
ctagcgaccaaatttgccgatttagataaagataagacctatctgctttattgtgacaga
ggtgtgatgagtaagcttcaagcgttatacctgcaagagcagggctatcacaacgtaaaa
gtgtatcgcccttaa
DBGET
integrated database retrieval system
