KEGG   Shewanella mesophila: K0I73_13315
Entry
K0I73_13315       CDS       T09171                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smes  Shewanella mesophila
Pathway
smes00740  Riboflavin metabolism
smes01100  Metabolic pathways
smes01110  Biosynthesis of secondary metabolites
smes01240  Biosynthesis of cofactors
smes02024  Quorum sensing
Module
smes_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:smes00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    K0I73_13315 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K0I73_13315 (ribD)
Enzymes [BR:smes01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     K0I73_13315 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     K0I73_13315 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QYJ85186
LinkDB
Position
complement(3002184..3003329)
AA seq 381 aa
MPWSKFDIEMMAKAIKLARKGLYTTRPNPSVGCVITLADKVIGEGYHIAAGGPHAEVHAL
KMAGELAQGATAYVTLEPCSHYGRTPPCAEALIKAKVARVVVAVTDPNPQVSGRGIKMLQ
GAGIQVDVDLLKEEAAQLNLGFMKRMATGLPWVSIKLAASLDGKTALSNGVSKWITGAQA
RRDVQRMRARHCAVITGIDTVLADDPSMNVRYQELGFVAKTLAPELMKQPLRIVLDSRAR
LNSDAKIFAIESPILLVSCEPYSAQAQAAWPSHVSHLQLDAVDGRVPLRELLNLLGKGHL
GKEYNAVMVEAGATLAGAFMTAQLADELVLYQAPKILGSHGRNLINLPDYTEMAQLPTLA
VKDQRKVGVDTRFIFNLAPSR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgccttggtcaaaatttgatattgaaatgatggcaaaagccatcaagcttgcacgtaaa
ggactttacaccactcgccctaatccaagtgttggctgcgtgatcaccctcgctgacaag
gtgatcggcgaaggctatcatattgctgctggtggcccccatgccgaagtgcatgcactt
aaaatggctggcgagttagctcaaggggctacggcctatgtgacccttgaaccttgcagt
cattatggccgaacgccgccatgtgcagaagccttgattaaggctaaggtcgctcgcgtt
gttgtcgctgttaccgatcccaatccgcaagtgtcgggtcgcgggatcaagatgttgcaa
ggggctggaattcaagtcgatgtcgatctgcttaaagaggaggcggcgcagcttaatctt
gggtttatgaagcggatggccacgggccttccttgggtgagcattaagctagcggcaagc
ctcgatggtaagacggcgctgtcaaacggggtctcaaagtggataactggcgcccaggcc
cgacgagatgtgcagcgaatgcgcgctcgtcactgcgcggtgatcaccggaatcgacact
gtacttgctgatgatcctagcatgaatgttcgttatcaagagctgggctttgttgctaag
acattagcgccagagctgatgaaacagccattaagaatcgtgctcgatagccgagcccga
ttaaactcagatgccaagatttttgcgattgagtcgcccatattgctggtgtcatgcgag
ccctatagcgcacaggcgcaggctgcttggccgtcacatgttagtcacctgcaactcgat
gctgtcgatggcagagtgccactaagagagttactcaatctccttgggaaagggcattta
ggtaaagagtacaatgcggtgatggtcgaagcgggagcgacgctcgccggtgcctttatg
acagcccaattggccgatgagttagtgctttatcaagcgccgaagattctaggtagccac
ggacgcaatttgatcaatttgcccgactatactgagatggcacaattgcccacgcttgcg
gtaaaagatcaacgtaaagtcggcgtcgatacgcgttttatatttaatttagcaccaagc
agataa

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