Sphingosinicella microcystinivorans: SmB9_08400
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Entry
SmB9_08400 CDS
T05811
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic00300
Lysine biosynthesis
smic01100
Metabolic pathways
smic01120
Microbial metabolism in diverse environments
smic01230
Biosynthesis of amino acids
Module
smic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SmB9_08400 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smic01002
]
SmB9_08400 (dapE)
Enzymes [BR:
smic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SmB9_08400 (dapE)
Peptidases and inhibitors [BR:
smic01002
]
Metallo peptidases
Family M20
SmB9_08400 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
BBE33182
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All DBs
Position
complement(853626..854762)
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AA seq
378 aa
AA seq
DB search
MSAAIDPLALARALIHCPSITPRDEGAQAVLAEALEAIGFKVWRHVWGEAPDGPVHNLFA
RIGSSGPHFAFAGHTDVVPVGNRDGWSVEPFAAEVRNGQLVGRGAADMKGAIAAFVAAAA
ENIPAQGSLSFIITGDEEGPATFGTKPLLDWMEATSNVPDHCLVGEPTSRQRLGDMVKIG
RRGSVNVWIRVQGAQGHVAYPHMADNPVRHLVNILHALQARELDTGNAWFDPSNLEITDM
TVGNPATNVIPAQAEARLNIRFNDEHTGAELVQWIEKVAARETAGASVEAKISGEAFLTE
PGDFSALLADAIRAETGAETEFSTSGGTSDARFIRRLCPVVEFGLPGQSMHKTDEHVAVD
DLHTLTRIYGRILRTYFA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccatcgatccgctcgcgcttgcccgcgcgctcatccactgccccagcatc
acgccgcgcgacgagggcgcgcaggccgtgctcgccgaagcgctggaggcgatcggcttc
aaggtgtggcggcacgtgtggggcgaggcgcccgacggcccggtgcacaacctgttcgcc
cgcatcggcagcagtggcccgcattttgccttcgccggacacaccgatgtcgtgccggtg
ggcaatcgcgacggctggtccgtcgagccgttcgccgccgaggtgcgaaacggccagctc
gtggggcgcggcgctgccgatatgaagggcgccattgccgcgttcgtcgcggcggcggcg
gagaatattcccgcgcagggctcgctcagcttcatcatcaccggcgatgaggaaggcccg
gcgacgttcggcacgaagccgctgctcgactggatggaggcaaccagcaacgtccccgat
cactgcctcgttggcgaacccaccagccgtcagcgtctcggggacatggtgaagatcgga
cggcgcggctcggtgaacgtttggattcgcgtgcagggcgcgcagggccacgtcgcctat
ccgcacatggccgacaaccccgtccgccacctcgtcaacatcctccacgcgctgcaggcg
cgcgaactcgataccggcaatgcgtggttcgatccgtcgaacctcgaaatcaccgacatg
accgtcggcaacccggcgacgaacgtgatcccggcgcaggcggaagcgcggctcaacatc
cgtttcaacgacgagcataccggcgcggagctggtccagtggatcgaaaaggtcgctgcg
cgggaaacggcgggtgccagcgtcgaggcgaagatttcgggcgaggcgttcctcaccgaa
cccggcgatttcagcgcgcttctcgccgatgcgatccgcgctgagacaggcgctgaaacc
gaattctcgacaagcggcggcacctccgacgcgcgcttcatccggcggctgtgcccggtt
gtcgagttcggcctgcccggccaatcgatgcacaagaccgacgagcatgtcgcggtggac
gatctccacacgctcacccgcatctacgggcgcattctccgcacgtatttcgcctaa
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