Sphingosinicella microcystinivorans: SmB9_24780
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Entry
SmB9_24780 CDS
T05811
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SmB9_24780 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smic01007
]
SmB9_24780 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smic03016
]
SmB9_24780 (lysS)
Enzymes [BR:
smic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SmB9_24780 (lysS)
Amino acid related enzymes [BR:
smic01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SmB9_24780 (lysS)
Transfer RNA biogenesis [BR:
smic03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SmB9_24780 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
BBE34820
LinkDB
All DBs
Position
complement(2635246..2636748)
Genome browser
AA seq
500 aa
AA seq
DB search
MLARLKGGVPAKGNVLFETGYGPSGLPHIGTFNEVLRTTMVRRAFAEMSDVPTRLLAFSD
DMDGLRKVPDNVPNQAMLTEHLGEPLSRIPDPFGKFESFAHHNNAMLRAFLDRFGFEYEF
ASSTDYYTSGRFDDQLKNVLANYQAIMDIMLPTLREERRRTYSPVLPISPVSGKVLQVPI
EVVDAAAGLIRFEEDGTTHEHCILSGGAKLQWKVDWAMRWVALDVDYEMYGKDLTDSGVQ
SGRIAKVLGGRKPEGLIYEMFLDEKGEKISKSKGNGLALEDWLTYGPGESVAFYAYREPK
SAKQLHIGVIPRAVDEYFQFRANYADQPLDKKLGNPVHHIHGGKVPDAAMPVTFGLLLNL
VGVMGADADRAQVWAYLGNYVPGASAEAYPEVDTLIGHALAYNRDFVAPTLKRRKPDARE
TAALRDLDARLAALPEGAEAEAIQNEVYAVGKEGGFENLRDWFAALYETLLGSSQGPRMG
SFIALYGIANTRRLIAEALA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcgcgtctgaaaggcggtgtgcctgcgaaaggcaacgtccttttcgaaaccggc
tacgggccatcgggcctgccgcacatcggcaccttcaatgaagtgctgcggaccacgatg
gtgcgccgcgccttcgcggaaatgtcggacgttccgacgcggctgctggcgttctcggac
gatatggacgggcttcgcaaggtgcccgacaacgtgccaaaccaggcgatgctgaccgaa
catcttggagagccgctgtcgcgcattcccgatccgttcgggaagttcgaaagcttcgcg
catcacaacaacgcgatgctgcgcgccttcctcgatcgtttcggcttcgagtacgaattc
gccagctcgaccgactattacacatcgggccgcttcgacgatcagctgaagaacgtcctc
gccaattatcaggcgatcatggacatcatgctgccgacgctgcgcgaggagcgccgccgc
acctattcgccggtgctcccgatcagcccggtttcgggcaaggtgctgcaggtgccgatc
gaggtggtggacgcggcggcaggcctcatccgcttcgaggaagacggcacgacgcacgag
cactgcatcctttcgggcggcgcgaagctgcaatggaaggtcgactgggcgatgcgctgg
gtggcgctcgacgtcgattacgagatgtacggcaaggatctgaccgattccggcgtgcag
tcgggccgcattgccaaggtgctcggcggccgcaagccggaaggcctgatctacgagatg
ttcctcgacgagaagggcgagaagatctccaagtccaagggcaacggcctcgcgctcgaa
gactggctgacctacgggccgggtgaaagcgttgccttctatgcctatcgcgagccgaag
agtgccaagcagcttcacatcggcgtgatcccgcgcgcggtggacgaatatttccagttc
cgcgcgaactatgccgaccagccgctcgacaagaagctcggcaaccccgtgcaccatatc
cacggcggcaaggtgccggacgcggcgatgccggtgacgttcggtctgctgctgaacctc
gtcggcgtcatgggcgcggacgcggaccgggcgcaggtttgggcctatcttggcaactac
gtcccgggtgcgagcgcggaggcgtatccggaggtcgatacactgatcggccatgcgctg
gcgtacaaccgcgatttcgtcgcgccgaccttgaagcgccgcaagccggacgcccgcgag
acggcggcgctgcgcgatctcgacgcgcggcttgccgcactgcccgagggcgcggaagcc
gaggcgatccagaacgaggtctacgcagtcggcaaggaaggcggcttcgaaaacctgcgc
gactggttcgcagcgctttacgagacgctgctcggatcgagccaggggccgcgcatgggc
agtttcattgcgctctacggcatcgccaacacgcgccgcctgatcgcagaggcgctggct
taa
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