Salvia miltiorrhiza (redroot sage): 130986335
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Entry
130986335 CDS
T09291
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130986335
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
130986335
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130986335
03036 Chromosome and associated proteins [BR:
smil03036
]
130986335
Protein phosphatases and associated proteins [BR:
smil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130986335
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130986335
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130986335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
TAF6_C
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
130986335
NCBI-ProteinID:
XP_057765709
LinkDB
All DBs
Position
5:complement(15860542..15865484)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGEEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDMLKTELRSMYSQLCQDDMPMVR
RAAATNLGKFAATVEAAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMVTNPHYLYRMTVLQAISLLAPVMGSDITCSKLLPVIVNATKDRVPNIKFNVAKVLQS
MIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgagccactgtatccaatagcagtcctgatagatgagttaaagaat
gaagacattcagttacggttgaactccatacgtagactatccaccattgcacgcgcgctt
ggggaggagaggactagaaaggagttgattccatttttgagtgagaacaatgatgatgat
gatgaggtgctgcttgctatggctgaagaattgggtgtcttcattccatatgttggagga
gaggaacatgctcacgtgctgctccctcctctagaaacactttgtactgtggaggagacc
tgtgtgagggacaaagctgtagagtccttgtgtaggattggatcacaaatgagggagagt
gatttggttgactcgtttattcctcttgtgaagagactggcagcaggcgagtggttcaca
gcccgtgtctctgcttgtggcttatttcatattgcatatccaagtgccccagatatgcta
aagacagaattaaggtccatgtacagccaattgtgtcaagatgatatgcctatggtgaga
agagcggctgcaacaaatttgggaaagtttgctgccacggtggaagctgctcatctcaag
actgatataatgtctatgtttgaggaccttacacaggatgatcaagattccgttcgctta
ctagctgttgagggctgcgctgctcttggcaagttgttggagcctcaggattgtgttgcc
catattctccctgtgattgtcaacttctcacaggataagtcttggcgtgttcgttacatg
gttgccaatcaattgtatgagctttgtgaggccgtggggcctgaacctactaggacggat
ttagttcctgcatatgtgcgcctgcttcgagataatgaagcagaagtgcgaattgcagct
gctggaaaagttacaaagttctgtaggattcttgatccggaacttgctatccagcatatt
cttccctgcgtaaaggaattgtcatcagattcttcgcaacacgtaaggtctgctttggca
tctgtcattatgggaatggctcctgtattaggaaaggatgcaacaatcgaacaacttctt
cccatatttctctccctcttgaaagacgaattccctgatgttcgcctcaatatcattagc
aagttggatcaagtcaatcaggttataggaatcgatctactctcccaatctttactacca
gctattgtcgagctggcagaagatagacattggagagtcaggcttgccatcatagaatat
atacctctgttggctagtcagttgggtgttggatttttcgacgacaagctcggtgccctt
tgcatgcagtggctgcaggacaaggtttactcaattcgagatgctgctgctaataatttg
aagcgtttggcagaggaattcggtccagaatgggcaatgcagcatatagttcctcaggtg
ttggatatggtgaccaacccacactatttgtaccgtatgaccgtgcttcaggcaatctca
ctacttgctccagtcatgggttccgacataacatgctctaaattattgcccgtcattgtt
aacgcgaccaaggacagggtgcccaacatcaaattcaatgtggccaaggtgttgcagtcg
atgatccccatcgttgatcaatcagtggtggagaagacgattcgtcccagtttggtcgag
ctctcggaggaccccgacgtcgatgttcgttttttcgcgaatcaagcactccagtcgatc
gatcatgtgatgatgtctagctag
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