Salvia miltiorrhiza (redroot sage): 131013175
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Entry
131013175 CDS
T09291
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131013175
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
131013175
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
131013175
NCBI-ProteinID:
XP_057797213
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Position
1:74700977..74710158
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AA seq
413 aa
AA seq
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MEQKLILIILFIISPCFTHSVKHENGVIFDIRKYGARPNSDISQALTKAWKEAIASPKAS
KIYIPRGIWMLSQVKLSGPNKAPILLQVEGTVKAYSEVHKLPDKRAEWITFGHIDHFTLA
GGVFDGSGQAAWKSNDCKKNRNCIKLPINLSFNFMDNSIIQDTTTKDSKNFHVKCLACNN
VTFQRLTVSAPGDSPNTDGIHLSHSSRVDILGARIETGDDCISMNSDMSHVRIRDITCGP
GHGISVGSLGGNAAEKDVSGIYVTNCTFIRTQNGVRVKTWPSGPATLEVSDLRFEDLVMI
EASNPVIIDQEYCPSNLCDRTKPSSIKVRKVSIKNIRGTTAKAEAITLNCSKTKPCEDVE
IGDVDLKYVGKNGRITTKCANVKPRFVGRQNPPVCASHFHHHSSFLGAHHHSS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaagctcatcttaataattctcttcataatttccccatgtttcacacatagt
gttaaacatgaaaatggtgtgatattcgatatcagaaagtatggcgcgagacccaattca
gatatcagtcaggccttaacgaaggcttggaaggaggcaattgcatcaccaaaggcaagc
aaaatatatattccacgtgggatttggatgctaagtcaagtcaaactatctggtccaaac
aaagcacctattttgctacaagttgagggcactgtgaaagcttattcagaggttcacaaa
ttgcccgacaaacgagccgagtggattacgttcggccatattgaccattttaccctcgcc
ggcggcgttttcgacggcagcggtcaggctgcctggaaatcaaatgattgcaaaaagaat
cgaaactgcatcaagcttccaataaacttgagcttcaatttcatggacaactccataatc
caagacaccaccaccaaagacagcaagaacttccacgtgaaatgcctcgcgtgcaacaac
gtgacgttccaacggctcaccgtctccgcccccggcgacagccccaacaccgacggcatc
cacctctcgcactcgtcgcgggtcgacatcctcggcgccaggatagagaccggcgacgat
tgcatctccatgaactccgacatgtcgcacgtgcgcatccgcgacatcacgtgcgggccg
ggccacggcattagcgtcggcagcctgggcggcaatgccgccgagaaagacgtgtcgggg
atctacgtcacgaattgcaccttcattcgcacccaaaatggggttagggttaagacgtgg
ccgtcgggcccggccacgttggaggtttccgatttgcggtttgaagatttggtgatgatt
gaggctagcaatcctgtgattattgatcaagagtattgccccagtaatctctgcgaccga
accaaaccgtcgagcattaaggttagaaaggtgagcatcaagaacatcaggggcacgacg
gcgaaggcagaagcgatcacgttaaactgcagcaagactaagccgtgcgaggatgtggag
atcggcgatgttgatttgaaatacgtcggaaaaaacggccgtatcaccaccaaatgcgcc
aacgttaagcctcgttttgtaggaaggcagaatccgccggtgtgtgcttcccatttccat
catcattcttcctttttgggagcccatcatcattcttcttga
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