KEGG   Salvia miltiorrhiza (redroot sage): 131020239
Entry
131020239         CDS       T09291                                 
Name
(RefSeq) cyclin-dependent kinase D-3-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03022  Basal transcription factors
smil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131020239
  09124 Replication and repair
   03420 Nucleotide excision repair
    131020239
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:smil01001]
    131020239
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smil03021]
    131020239
   03019 Messenger RNA biogenesis [BR:smil03019]
    131020239
   03400 DNA repair and recombination proteins [BR:smil03400]
    131020239
Enzymes [BR:smil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     131020239
    2.7.11.23  [RNA-polymerase]-subunit kinase
     131020239
Protein kinases [BR:smil01001]
 Serine/threonine kinases: CMGC group
  CDK family
   131020239
Transcription machinery [BR:smil03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     131020239
Messenger RNA biogenesis [BR:smil03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     131020239
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     131020239
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 131020239
NCBI-ProteinID: XP_057804928
LinkDB
Position
4:50075879..50081582
AA seq 423 aa
MADMDQLLTKKVADRYLKREVLGEGTYGVVYKAIDTKTGQVVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPADIKSYIQ
MTLKGLSFCHKKWVLHRDMKPNNLLIGPGGQLKLADFGLARIFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQWSD
MVYLPDYVEYQHVPGQPMRTLFPMASDDCLDLLGKMFMYDPKARISAQQALEHRYFSSIP
PPTEPALLPRPPPKKEPVNPKVSDFNPLDGPTVLSPPRKQRRVMPHREGFDVNAHNMIKM
DDHGNETRQAAGERSEHAPMSLDFSVFGMRPPNRPTINSADRSHLKKKLDLEFQLPEEEE
EEE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcggacatggatcagttgttgaccaagaaagtagccgatcgttatctgaagcgcgaa
gttcttggtgaaggtacatacggtgtcgtttacaaagccatcgatactaagactgggcaa
gttgttgctatcaagaaaattcgtttggggaagcagaaggaaggtgtcaattttacagct
ttaagggaaattaagttgctcaaagagctcaaggatcctaatatcatcgagttgattgat
gcattccctcacaaggggaacttgcaccttgtgtttgagtttatggagacagatcttgaa
gctgttattcgtgatagaaatattgttctttctccagctgacatcaagtcgtacatccag
atgacactgaaggggctttctttttgccataaaaaatgggtcctgcacagggacatgaaa
ccgaacaacttgctgatcggacctggtgggcaacttaaacttgcagattttgggttagct
cgtatattcgggagccctgatcgaaggttcacacatcaggtttttgctagatggtacaga
gctcccgagcttctgtttggtgccaaacaatatggtccgggggtggatgtatgggctgca
gcatgtatatttgctgagctgcttttacgtcgaccttttctgcagggaaacagtgatatc
gatcaactgggaaagatctttgcagcttttgggacgccaaagccatcacaatggtcagat
atggtctatcttccagattatgtggaatatcagcatgtgcctggtcaaccaatgcgcacg
ttgtttcccatggccagtgatgattgtttggaccttttagggaaaatgttcatgtatgat
cctaaagcgagaatttcagcacaacaagctctggagcataggtacttttcttccatacct
ccacctacagaacctgctttgcttccaagacctccaccaaagaaggaacctgtcaatcca
aaggtctcagactttaatcctctggatggaccaacagtgttgtctcctcctagaaaacaa
agaagagtcatgcctcatcgtgagggctttgatgtcaatgctcacaatatgatcaagatg
gatgaccatggcaatgagacaaggcaggcggctggggagaggagtgagcacgctccaatg
tctttggatttttcagtttttggcatgaggccgccaaatagaccaactattaacagtgct
gacagatctcatctaaagaagaaactggatcttgaatttcaactacctgaagaagaagaa
gaagaagaataa

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