Salvia miltiorrhiza (redroot sage): 131022206
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Entry
131022206 CDS
T09291
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131022206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131022206
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131022206
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131022206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
131022206
NCBI-ProteinID:
XP_057807628
LinkDB
All DBs
Position
4:2837490..2852308
Genome browser
AA seq
1191 aa
AA seq
DB search
MAASSGQVEEEKIGRQTWRPHLAEEKDYEALRELFRHHIDSFDHMTEHGLETTLQNIKPV
EVFDPNTKLKLRIWLSTPEIYPPQKERMSRTMSDPLYPFECRQAKLTYAGMFMVDLNIQY
GTGGVIREKISLGQLPIMLKSKLCHLRAANNPKKLVLHKEEPSEMGGYFILNGLERVIRL
LILPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVTVKLYYLNNGSARLGFWIQ
GREYLLPVGIILKALTETTDHEIYVSLVCCYSDKYDRGKGSVGTQLIGERAKIILDELQY
FSLYTRTQCLQHIGEHFQALMVGMEKQSYSDVADAVLRDYIFVHLDDNIDKFNLLILMLQ
KLFSLVDQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRAKRALQEEIGNNAKKF
ELSSVADVRRVIDRTSPKQIGAAIENMLKTGRLVTQSGLDLQQRAGMTVMAERLNYLRFI
SHFRAIHRGSSFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSSCRLTSYYDS
EGKVKDFLEIRKSILKVLVSIGMTPALPKLLLAGPPEVLPVLLDGRVVGSIASNIIEKAV
CHMRRLKVSETSVIPEDLEVGYVPLSMGGAYPGLYLFTSASRFVRPVRNIQIPSEESNNI
ELIGPFEQVYMEISCPDGGNGGRKDVFPATHAEIHPTGILSVVGNLTPWSDHNQSPRNMY
QCQMAKQTMGFSCQAINSRADQKLYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLA
YSGYDMEDAMVLNKSSVERGMCRGYIYQTETIDLAEQNIKADRSQRSFGRSNLDKSSHQL
IDSDGLPFVGQRISPGEPYCGIYNEITSTVSTNKLKGSDHAYVDYVAVDVKNKKHIQKAN
IRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGVTGMRPDLIINPHAFPSRMTIA
MLLESIAAKGGALHGNFVDATPFSSSMKKSEGSESDSSSLVDELGSLLVERGFNYHGLEV
LYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGVRFG
EMERDSLLAHGAAYLLHDRLHKSSDYHIADVCSLCGSILSTSLILSPKKEVRDMIGIRLP
SKAPKKVTCVSCRTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaagtagcggtcaagtggaggaagagaagatcggcaggcagacatggcggccg
cacctggcggaggagaaggactatgaagcactaagagagcttttccggcaccatattgac
tcattcgaccacatgacagagcacgggctcgagacgacgttgcagaacattaaacccgtc
gaagtcttcgatcctaacaccaagctcaagcttagaatttggctatccactccggaaata
tatcctcctcaaaaagagcgaatgtccagaactatgtcagatccattatatccttttgag
tgtagacaagcaaaactcacgtatgctgggatgttcatggtggatctgaatattcagtat
ggtactggaggagtcataagagagaaaattagtcttggtcagttacctatcatgttaaag
tccaaactctgtcatcttagggcggcaaataatcccaagaaattagttttacacaaagaa
gagccttcagaaatgggaggatactttatcctgaatgggcttgagagagttattcgtctt
ctgatactaccaaagcggaactatccaacgagcatggtgcgcaattcttttcgtgaacgg
cgtgaaggttataccgataaagccgtagtcataagatgtgttagagaagaccagtctgcg
gtgacagttaaactatactaccttaataatgggagtgcaaggcttgggttctggatacaa
gggagggagtatttgcttcctgttggaatcatattaaaggctctgactgagacgactgat
catgaaatctatgtgagtttagtatgctgctacagtgacaagtatgatcgaggaaaggga
tctgttggcactcaactcattggtgaaagagcaaaaattattttggatgaacttcagtat
ttctctctctatactcgcactcagtgtctgcaacatattggggagcatttccaagctctt
atggtgggaatggaaaaacaaagctactctgatgttgctgatgctgtgttaagagattac
atatttgtccatctagatgataatattgacaagttcaatctactcattttaatgctgcag
aagttgttttctctcgtagaccagacttcagtaccggacaatccagattctttacaaaac
caagaggttctattacctggtcacttaataactatttatctcaaggaaaaattacaagac
tggttactgagggcaaaacgagcactacaagaggaaataggcaacaacgccaaaaaattt
gaattaagcagcgtggcagatgtcaggagagtcattgatagaacttctccaaagcaaatt
ggggcagctattgaaaatatgctgaagactggaagattggttacacaatcaggtctagat
ctacagcagagagctgggatgacagttatggccgagagattaaattatctgcgtttcatt
tcacacttccgagctattcatcgaggttcttcatttgctgggcttcgtacgacaagtgtt
cggaagttgttgcctgaatcttggggctttctgtgtcctgttcacacacctgatggtgag
ccatgtgggctgctgaaccatatgacttcttcttgtcggttaacttcatattatgattca
gaagggaaagtaaaagacttccttgaaatccggaagtcaatattaaaagttttggttagc
attggaatgactccagcattgccgaagcttctgctagctggccctcctgaagtacttcct
gtgcttctagatggtcgtgtagtaggttctattgcttctaatattatagaaaaggctgtc
tgccatatgcggaggttaaaggtttcggaaacttctgtgatacctgaagatcttgaggtt
ggttatgttcctttgagcatgggtggagcttaccctggcttgtacctgttcacatctgca
tctagatttgttcgtccagtgcggaatatccagataccttctgaagagagcaacaatatt
gagctcatagggccctttgagcaggtttacatggaaataagttgtcctgacggaggaaat
gggggaaggaaggatgtttttcctgctactcatgcagaaattcatccaactggaatattg
agtgttgttggaaatcttacaccttggtctgaccacaatcagagtcctcgtaatatgtac
cagtgtcagatggcaaaacaaacaatgggtttttcttgtcaagctataaactctcgagct
gatcaaaagctgtatcatcttcagaccccacagacacctattgtgcggacaaagacatat
gagaagtacaatatcgatgactgtccacttggaactaatgcaattgtagcagttttagca
tattcaggatatgacatggaggatgcgatggttttaaataagtcatctgtggagcgtggc
atgtgccgcggatacatataccagacagaaacaattgacttggctgaacaaaacatcaag
gcggatcgctcccagagatcatttggcagaagcaatctggataaatcaagtcatcaattg
attgattctgacggtctcccatttgttgggcagaggataagccccggtgagccgtattgt
ggcatctataatgaaattacaagtactgtatcaacaaacaagttaaaaggttcagatcat
gcgtatgttgattatgttgctgttgatgtgaaaaacaaaaagcacatacaaaaggcaaac
attcgttttaggcatccaagaaatccagtaattggggataaatttagcagcagacatggt
caaaagggtgtttgctctcagctttggcaggatactgacatgcctttctctggagtcacc
ggaatgcgaccagatcttatcattaatcctcatgcatttccttctaggatgacaattgct
atgcttttagaatcaattgctgctaagggaggcgccttgcacggaaatttcgtggatgct
acaccattttcaagctctatgaagaagtcggaagggtcagaatctgactctagttcactc
gtagatgaactcggttcacttttggttgaacgcgggttcaattaccacgggttagaggta
ttgtacagtggcgtttacgggacagagctgacgtgtgaaatatttattggtcctgtatat
tatcagcgtctccggcacatggtttcagataaattccaggttcgttccacaggaacaatt
gatcaggtgacaagacaacctatcaaaggaagaaagcgcggtggtggtgtacgttttggg
gaaatggaacgagattcacttctagctcacggtgctgcatacctgttacacgacaggctc
cacaagagttccgactatcacattgctgacgtgtgctccctttgcggaagcatcctgtcg
acatcactaatcttgtcgcctaagaaagaagtgcgcgatatgattggtataaggctacct
agcaaggctccgaaaaaggtcacgtgtgtctcttgccggactagtaagggtatggagact
gtcgctatgccttatgtcttcagatatttagctgcggaattggcagcaatgaacataaaa
atgactctccaactgagtaacggagccggagcttga
DBGET
integrated database retrieval system
