Sphingobacterium mizutaii: 4412673_00040
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Entry
4412673_00040 CDS
T05395
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smiz03009
]
4412673_00040 (rimO)
Enzymes [BR:
smiz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
4412673_00040 (rimO)
Ribosome biogenesis [BR:
smiz03009
]
Prokaryotic type
ribosomal protein modification factors
4412673_00040 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
SNV35234
LinkDB
All DBs
Position
1:31376..32710
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AA seq
444 aa
AA seq
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MKTKQSKTAPVQAKPRVNVVTLGCSKNIHDSEVLMGQLKGNQMEVVHEASNIQINDIVVI
NTCGFIDNAKQESIDTILQFSELKDQGKVNKVIVTGCLSERYKPELQSEIPNVDAFFGTN
DLPDLLSSIGADYRHELLGERLLTTPSHFSYFKIAEGCNRPCSFCAIPLMRGKHVSKSID
DLVKEAKFLASNGTKELILIAQDLTYYGLDIYGKRNLSDLLRHLSDVEGIDWIRLQYAYP
SGFPMDILDAMNERSNICNYLDMPLQHISDRMLTSMRRGTSKQKQIDLVNKIRDKVPDIA
LRTTLICGYPGETEGDFQEMLEWVEETRFDRLGCFTYSHEEKTHAHSLEDDVPEEVKQDR
VDQIMEVQQGISYEINQDKVGNTYKVLVDRVDGDYFIGRTEYDSPEVDNEVVLEAKSNYA
RIGDFVQVKVDRAEDFDLYGNIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaacaatcaaaaacggctcctgtacaggcaaagccacgtgtgaacgtggtg
accttaggctgctctaaaaacatacatgatagcgaggtgctgatgggccaattaaagggc
aatcagatggaagtagtccacgaagcttccaatatccaaattaatgatatcgtggtgatc
aatacctgtggttttatcgataatgccaaacaggaatccattgacaccatccttcaattt
tcagaattaaaagaccaagggaaagttaataaagtaattgttacgggttgtttatcagaa
cgatacaagccggaattgcaatctgaaatccctaatgtggatgctttttttggaacgaat
gatcttcctgatcttctttccagtatcggtgcggactatagacatgaattacttggtgag
cgtctattgacgaccccttcccatttttcttatttcaagattgcggaaggctgtaatagg
ccttgttcattctgtgccatcccattgatgcgaggaaagcatgtgtctaaatctattgat
gatctggtaaaagaggctaaattcttggcttctaatggtaccaaagagttgatcttgatc
gctcaggatctgacttattatgggctggatatttacggtaaacgtaatttatcggacctg
ttgcgccatttatcggatgtggaaggaattgattggatccgtttgcaatatgcttatcct
tccggtttcccgatggatatcttggatgccatgaacgaacgttccaatatctgtaactac
ttggatatgccattgcagcatatctcggatcgcatgctgacttctatgcgtagaggaaca
agcaaacaaaagcagatcgatctagtaaacaaaatccgtgataaagttcctgatattgct
ttgagaacaacattgatctgtggttatccaggagagacggaaggagacttccaggaaatg
ttggagtgggtagaggaaaccagatttgatcgtttgggttgttttacttattcgcatgaa
gaaaaaacacatgcgcatagccttgaggacgatgtgcctgaggaagtaaaacaggatcgt
gtggatcagatcatggaagttcagcaaggaatttcttatgaaatcaatcaagataaagtt
ggaaatacctataaagtgttggtggatagggtagacggtgattattttatcggtaggact
gaatatgattctcctgaggttgacaatgaggtggtattggaagcgaaatccaactatgcc
cgcattggagactttgttcaggtgaaggttgaccgtgcagaagactttgacttgtacgga
aatattgtcaaataa
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