Sphingobacterium mizutaii: 4412673_02508
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Entry
4412673_02508 CDS
T05395
Symbol
fadB_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00071
Fatty acid degradation
smiz00280
Valine, leucine and isoleucine degradation
smiz00310
Lysine degradation
smiz00362
Benzoate degradation
smiz00380
Tryptophan metabolism
smiz00410
beta-Alanine metabolism
smiz00640
Propanoate metabolism
smiz00650
Butanoate metabolism
smiz00907
Pinene, camphor and geraniol degradation
smiz00930
Caprolactam degradation
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
smiz01120
Microbial metabolism in diverse environments
smiz01200
Carbon metabolism
smiz01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
4412673_02508 (fadB_1)
00650 Butanoate metabolism
4412673_02508 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
4412673_02508 (fadB_1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
4412673_02508 (fadB_1)
00310 Lysine degradation
4412673_02508 (fadB_1)
00380 Tryptophan metabolism
4412673_02508 (fadB_1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
4412673_02508 (fadB_1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
4412673_02508 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
4412673_02508 (fadB_1)
00930 Caprolactam degradation
4412673_02508 (fadB_1)
Enzymes [BR:
smiz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
4412673_02508 (fadB_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
4412673_02508 (fadB_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
4412673_02508 (fadB_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
DAO
NAD_binding_2
ECH_1
F420_oxidored
ApbA
GIDA
UPF0146
NAD_binding_8
UDPG_MGDP_dh_N
Shikimate_DH
AlaDh_PNT_C
NAD_Gly3P_dh_N
DUF4518
Pyr_redox_2
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
SNV51740
LinkDB
All DBs
Position
1:complement(2860637..2862736)
Genome browser
AA seq
699 aa
AA seq
DB search
MSKIKERIKEQISVSKNADGVYQLRWINVRSRPHDLSLDEFKFCIELLLSVLKKSDCTSL
QLILEGKFRDADYEELIYMAGKEGFLTKLEHIDEMIIELSEIEKPTVVLFDKACTGLAAA
FLLLFDRRIGIGPKAKMGFPEGAFGMLTGNGSFSKLLGLVDAEFVFDLLNSGRLIKPEEA
EKTGLIQDRISSWEQVQAWLQENSALNKSHKFKWKVDQGKLSEAIQKLNAKAIKPLLLTE
VILSLIQGSEGQSYKELLTKEHLAYVGLLTAKETLTRVRTFHYAVEDAISMCKEVEDAEI
SKVAVIGAGMMGSGIAYEVAKAGIDVILKDVDLQNAEKGRAYSEKLCNKLIELNKMKEDD
KPKILERILPTDQLEDLDGAEIIVEAVFEDKRLKAEVINDSKRYLAQSGLFASNTTSLPI
SKLSKSFDDPSRFIGLHFFSPVDRMALVEVIRGKETSEETLDKALSFVGKLKKIPIVVND
GPAFFTSRIFFYYLLEGITMLLEGVPMERIEEGAKLAGFAVGPLAVLDEISLPLMVHVYE
QLPDMSFSQKRVYNYLQRMIKKGRTGRKSSRGFYDYPDNKPKKYYSDPELKDLDSQISAK
DIQDRLLAVLALDSYRCLEEGILFSPIDGDLGSVMGLGYPVQTGGVFGYIDMIGLDEFVK
ICENFSQYGDEWEIPDSLVKLRDEGFQFYDGFESNWVDE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattaaggagagaattaaagagcaaatcagtgtcagtaaaaatgctgatggg
gtctatcaattgagatggatcaacgtaagatcgcgcccacatgatctttcattagatgaa
ttcaagttctgtatcgaactacttctttctgtccttaagaaaagtgattgtactagtttg
caattgatcttggaaggaaagtttagggatgcagattatgaggaattgatctatatggcc
ggaaaagaaggtttccttactaaattagagcatatcgatgaaatgatcattgagctttct
gaaatcgagaaaccgacggttgttttatttgataaagcttgtacaggtttggcagctgct
tttctgttgctatttgatcgacgtattgggatcggtcctaaagccaagatgggtttccca
gaaggtgcctttggcatgttgaccggtaacggaagcttcagtaaattattagggcttgtg
gatgcagaatttgttttcgatctattaaattcaggtaggttgatcaaacctgaggaagct
gaaaaaacaggtcttatccaagatagaatcagttcttgggaacaggttcaagcttggctc
caggaaaattcagccctcaataagtcccataagttcaaatggaaggttgatcagggtaaa
ttatcagaagccatacaaaaattaaatgccaaggctataaagcctttgttgctgactgag
gtaatattgagtttgatacaaggttctgaagggcagagctataaagagttgctgacaaag
gaacaccttgcctatgtaggtttgttgaccgcgaaggaaaccctaacaagggtgagaaca
ttccattatgcagttgaggatgcgatttccatgtgtaaagaagttgaagatgcggaaatc
agcaaggtcgcagttatcggagctgggatgatgggttctggtatagcctatgaagtggcg
aaagcaggaattgatgtgatcttaaaggatgtggatctgcaaaatgccgaaaagggcaga
gcttattctgagaagctgtgcaataaactgattgaattgaataagatgaaggaggatgat
aagcctaagatattagagcgcattcttcctacggatcaattagaggatttagatggtgcg
gaaattattgttgaagcagtctttgaagataagcgattgaaagcggaagtcatcaatgat
agcaagcgatatttagcacaaagtggtctattcgcatccaatactacttctttgccgatc
agtaaattatcgaaatcatttgatgatcctagtcgttttattggtttgcattttttctcg
ccggtagatcgtatggcattggtggaagtcatccgcggtaaggaaacctcggaggaaaca
ctggataaagcattgagttttgtcggtaaactcaaaaagatcccgatcgtggtgaatgat
ggaccggcattttttacctcccgaatatttttctattacctattggaaggaattaccatg
ttgttagagggtgttcctatggaaagaattgaggaaggcgctaagcttgcaggttttgcc
gtaggtccattagcggttttggatgagatctcattgccattgatggtccatgtatatgaa
cagttgcctgatatgagcttcagtcagaagagagtatacaactacctacagcggatgatc
aaaaaaggaaggaccggaagaaaatccagtcgtgggttttatgattatccagataataag
cctaaaaaatactattccgatcctgaattaaaggatcttgatagccaaatttctgcaaaa
gatatccaagatcgattattggcggttttggctttggatagttatcgttgtctggaagaa
gggattttatttagtccaattgatggggatctaggttccgtaatgggattaggctatcca
gttcagaccggtggggtatttggttatatcgatatgatcggtttggatgaattcgtcaag
atctgtgaaaatttcagtcaatatggcgatgaatgggagatcccagattcattggtcaaa
ttgagagatgaaggtttccagttttatgatggatttgaatctaactgggttgatgagtag
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