KEGG   Schistosoma mansoni: Smp_128840
Entry
Smp_128840        CDS       T01095                                 
Name
(RefSeq) putative dna-directed rna polymerase II 19 kD polypeptide rpb7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
smm  Schistosoma mansoni
Pathway
smm03020  RNA polymerase
smm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Smp_128840
  09124 Replication and repair
   03420 Nucleotide excision repair
    Smp_128840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smm03021]
    Smp_128840
   03019 Messenger RNA biogenesis [BR:smm03019]
    Smp_128840
   03400 DNA repair and recombination proteins [BR:smm03400]
    Smp_128840
Transcription machinery [BR:smm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Smp_128840
Messenger RNA biogenesis [BR:smm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Smp_128840
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Smp_128840
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 8341595
NCBI-ProteinID: XP_018650094
LinkDB
Position
2:complement(15347742..15354752)
AA seq 194 aa
MVLERLVRLKMIMGVGSMRVHRSNSRTIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGT
CSGKYGFIIAVTNIEHIGAGIIQPNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGV
FAEAGPLTIFISKYSVPSNIKFEGAETTTDGLNDEDEEETQTVQIEDRIRIRIIGLRVDA
SDIVHALSFQTVEF
NT seq 585 nt   +upstreamnt  +downstreamnt
atggtcctcgaacgcttggtccgactcaagatgatcatgggagttggctctatgcgtgtt
catagatccaactcacgaacgataaagttagaacatgaaatattattacaccctaaatat
tttggaccgaatctaacagaaacagtgaaaaccaaattgttttcagacgtcgaaggaact
tgctccggaaagtatggctttatcatcgctgtcacaaacatagagcatatcggtgctggt
ataatacagccaaacagaggatttgtgcaataccgtatagtatatcgtgccatcgtctat
cggccgttcaagggcgaggtcgtcgatgctatcgttacccaggttactaaggttggggtg
tttgcggaagctggtcctctcactatttttatttctaaatattctgtcccttccaatatt
aaatttgaaggtgctgagacaaccaccgatggcctcaacgatgaagatgaagaagagacc
caaacagtgcagattgaagatcgcattagaatccgcataattggtctccgagttgacgcc
agtgatatcgtccatgcacttagtttccaaactgttgaattttaa

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