Schistosoma mansoni: Smp_128840
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Entry
Smp_128840 CDS
T01095
Name
(RefSeq) putative dna-directed rna polymerase II 19 kD polypeptide rpb7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
smm
Schistosoma mansoni
Pathway
smm03020
RNA polymerase
smm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Smp_128840
09124 Replication and repair
03420 Nucleotide excision repair
Smp_128840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smm03021
]
Smp_128840
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_128840
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_128840
Transcription machinery [BR:
smm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
Smp_128840
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Smp_128840
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Smp_128840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
8341595
NCBI-ProteinID:
XP_018650094
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All DBs
Position
2:complement(15347742..15354752)
Genome browser
AA seq
194 aa
AA seq
DB search
MVLERLVRLKMIMGVGSMRVHRSNSRTIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGT
CSGKYGFIIAVTNIEHIGAGIIQPNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGV
FAEAGPLTIFISKYSVPSNIKFEGAETTTDGLNDEDEEETQTVQIEDRIRIRIIGLRVDA
SDIVHALSFQTVEF
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcgaacgcttggtccgactcaagatgatcatgggagttggctctatgcgtgtt
catagatccaactcacgaacgataaagttagaacatgaaatattattacaccctaaatat
tttggaccgaatctaacagaaacagtgaaaaccaaattgttttcagacgtcgaaggaact
tgctccggaaagtatggctttatcatcgctgtcacaaacatagagcatatcggtgctggt
ataatacagccaaacagaggatttgtgcaataccgtatagtatatcgtgccatcgtctat
cggccgttcaagggcgaggtcgtcgatgctatcgttacccaggttactaaggttggggtg
tttgcggaagctggtcctctcactatttttatttctaaatattctgtcccttccaatatt
aaatttgaaggtgctgagacaaccaccgatggcctcaacgatgaagatgaagaagagacc
caaacagtgcagattgaagatcgcattagaatccgcataattggtctccgagttgacgcc
agtgatatcgtccatgcacttagtttccaaactgttgaattttaa
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