Selaginella moellendorffii: SELMODRAFT_128226 Help Entry SELMODRAFT_128226 CDS       T01496                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism smo  Selaginella moellendorffii Pathway smo03020   RNA polymerase smo03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:smo00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SELMODRAFT_128226   09124 Replication and repair    03420 Nucleotide excision repair     SELMODRAFT_128226  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:smo03021]     SELMODRAFT_128226    03400 DNA repair and recombination proteins [BR:smo03400]     SELMODRAFT_128226 Enzymes [BR:smo01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SELMODRAFT_128226 Transcription machinery [BR:smo03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      SELMODRAFT_128226 DNA repair and recombination proteins [BR:smo03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       SELMODRAFT_128226 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  9638622 NCBI-ProteinID:  XP_002988518 JGI:  128226 UniProt:  D8SYZ7 LinkDB All DBs Position Unknown AA seq 1797 aa AA seqDB search MDLRFPYSPAELARVKRVQFGLMSPDEIRQMSVCKIESSETYDRGKPKSGGLSDPRLGTI DRQTKCETCGGSMAECPGHFGHLELAKPMFHIGFLKTVLALLRCVCYNCSHILALEVCRE TLLLCFIFGLFKLAKKAKNPKQRLKKVLECCKNKQKCEGNNNDMDGEQDDQEGEQKGHGG CGAQQPKITIDGMKIIAEFKVPKKKGDDQDQYLPEPVERKQQLTAERVLGILKRISDEEC RILGLDPQFARPDWMILQVLPIPPPPVRPSVMMDSSARSEDDLTHQLAMIIRHNNNLKRQ EQNGAPTHIINEFTQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICQRLKAKEGRIRGN LMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNLERLKELVEYGPHPP PGKTGAKYIIREDGQRLDLRYLKKSSDRHLELGYKVERHLCDGDFVLFNRQPSLHKMSIM GHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVSELMIVPKCIVSPQS NRPVIGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPTPAIVKPRPIWTGKQ IFSLIIPKQINMVRTAAWHNDSETGDNSPGDTMVRIEKGELLTGTLCKKTLGTSSGSLIH VIWEEVGPDAARKFLGHTQWLVNYWLLQHGFSIGIGDTIADSATMEKINDTIFKAKNEVK DLIKIAQEKQLESQPGRTMMESFENRVNQVLNRARDEAGSSAQKSLSESNNVKAMVTAGS KGSFINISQMIACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQ EFYFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGED GMDAVWIESQHLDSIKMKKKNFDMTYKFEVDNENWNPDYMASDCAEDIKTIQEIRNVFDA EVQKLEADRKQLGLEIATSGEPHWPLPVNLKRLIWNAQKIFKIEMKKPSDMHPMEIVEAV DKLQEKLLVVPGDDPISIEAQKNATLFFNCLLRSTFASKRVLKEYRLTKEAFEWVIGEIE TRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKK IKTPSLYVHLKPEVSKEKERAKNVQCALEYTTLRSVTQATEIWYDPDPMSTIIEEDVEFV KSYYEMPDEDVTPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFVDDLTCIFNDDN AEKLILRVRIMNDDVSKGGEVDQSDDDVFLKKIESNMLTEMALRGIPDIHKVFIREHKRQ RFDEHEGFKTETEWMLDTEGVNMLAVMCNEDVDATRTVSNHLIEVIEVLGIEAVRQALLK ELREVISFDGSYVNYRHLAILCDVMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILL DAAVFAEADHLRGVTENIMLGQLAPIGTGDFGLLLNDKMLEHAIELQLPSYMETADFGLG GVTGTPHHEGMMSPSYLLSPNLRASPITDAQFSPYVGGITFSPGAYSPLSPAYSPAGYSP ASPNYSPSSPTYSPSSPAYSPASPAYSPSSPGYSPASPAYSPTSPSYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPSSHTYSPSSLKYSSASPSYR NT seq 5394 nt NT seq  +upstreamnt  +downstreamnt atggatctccggttcccttactctccggcggagctggcgcgggtcaagcgcgtccagttt gggctgatgagccctgacgaaattcggcaaatgtccgtctgtaagatcgagtcgagcgag acttacgacaggggtaagccaaaatctggcggcctcagcgacccgagactgggaacgatt gaccgacaaaccaagtgtgagacttgtggcgggagtatggctgagtgtcctgggcatttt gggcatttagagcttgccaagcccatgtttcacatcggattcctcaagacagtactggcc ctcctccgctgtgtgtgctacaactgctcgcatatcctagcactcgaggtttgtcgcgaa acgctgctactttgctttatctttggtttgttcaagctcgcgaaaaaggcgaagaatccc aagcagaggctcaaaaaggtcttagagtgctgtaagaacaagcagaaatgcgagggaaac aacaacgatatggatggcgaacaagatgatcaagagggcgagcagaaaggccacggaggt tgtggagctcagcagccgaaaatcaccattgacgggatgaagattattgccgagttcaag gttccaaaaaagaaaggcgacgaccaggatcagtatttgccagagcctgtcgaaagaaaa cagcaacttactgctgaaagggttctgggtatactaaagaggataagtgacgaggaatgc cgcatactcggtcttgatcctcagtttgctcgtccagactggatgattttacaagttttg cccattccacctccacccgtgaggccttctgtgatgatggacagctcggcccgcagtgaa gacgacttaactcaccaacttgccatgataattcggcacaataacaacctgaagcggcag gagcagaatggtgcgccgacacatattatcaatgagttcacccagctcttgcaatttcat attgcgacatatttcgataatgatcttcctggccagccaagggcaacacaacgctctggt agacccatcaaatccatctgccaacgcctaaaggctaaagagggacggattcgtgggaac ctgatgggcaagcgtgttgatttttctgctcgaacagttatcaccccggatccgaatatc aatattgacgagctaggagtgccatggagtattgcgttgaacttgacttatccagaaact gtgactccatataacctcgaacgattgaaagagctggtggaatatgggccgcatccaccc cctggtaaaacaggtgcaaagtatatcattagagaagatggtcagcgtctggatctaagg tatctcaaaaagagcagtgatcggcacttggaacttggctacaaggttgagagacactta tgcgacggcgattttgtgctctttaaccggcagccaagtctgcataaaatgtcaatcatg ggacaccgaatacggataatgccttactcgacgtttcggcttaatctctccgtgacgagt ccatacaatgctgattttgatggggacgagatgaacatgcatgtgcctcagtctttcgaa accagggctgaggtctcagagctcatgatcgttcccaagtgtatagtgtctccgcagtcg aacagacccgttattggaatcgtccaggacacacttcttgggtgtcgaaaagtaaccaag agggatacttttattgaaaaggacgttttcatgaacatcctgatgtggtgggaagatttt gatgggaaagtgccgactccagcaattgtcaaaccaaggccaatatggactggaaagcag atttttagtctgattattcccaagcaaatcaatatggtgcgaactgctgcctggcataat gacagtgaaacgggcgataattctcctggtgacacgatggtgcgcatcgagaagggcgaa ctcctgactggcacactctgtaaaaagacattaggaacatcgtctgggagtttgattcac gtcatatgggaggaagtcgggcctgatgctgctcgcaaatttttgggtcatacacagtgg cttgtcaattattggttgctgcaacacggtttcagcattggtattggagacacaattgct gactctgcaaccatggagaagattaatgacactatctttaaggccaagaacgaagtgaaa gacctgattaaaatcgcgcaagagaagcagctagagtctcagcccggtcgaacaatgatg gagtcttttgaaaacagagtcaatcaggtccttaacagagctcgtgatgaagccggaagc agtgctcagaaaagcttgtctgagagcaacaacgtaaaagctatggtgaccgctggatcg aagggctcgttcatcaacatatcccagatgattgcttgtgtgggacagcagaacgttgaa gggaaacgaattccgttcggtttcatcgacagaacgctcccgcactttacaaaggatgac tacggccccgagagtagggggttcgtcgaaaattcttatctacggggtctcacaccgcag gagttctactttcacgccatgggaggtcgagagggtcttatcgatacagcagtgaagact tcggagacaggttacatccaaagacgtctagtgaaggcaatggaagacgtgatggtgaaa tacgatggcacagttcggaattcgctgggggacgttatacagttcttatacggagaagat ggcatggacgcggtttggattgaatcacagcatctcgactccatcaaaatgaagaagaag aattttgatatgacttataagttcgaggtggataacgagaactggaatccggactacatg gccagcgactgtgcagaagatattaagaccatccaggagattcgcaacgtgtttgatgcc gaggtccagaagcttgaagccgatcgcaagcaactcggtctggagattgcgacttctggg gagccgcactggcccttgccggtcaatctgaagcgtctcatttggaacgcgcagaagatt ttcaagattgaaatgaagaagccatcggacatgcatcctatggagattgtggaggcagtg gacaagctgcaggagaagctactggtggtgcctggtgacgacccgatcagtatcgaagct cagaagaatgccaccttgttcttcaactgtctacttcgtagcacgttcgccagcaagcgt gttctcaaggagtacaggttgacgaaggaggcctttgagtgggtcattggagagatcgag acgcggttcttgcagtcactggtggcacccggggagatgatcgggtgcgtggctgctcaa tccatcggcgagccggctacacagatgacgctgaatactttccactatgctggtgtcagt gcgaagaacgtcactctcggtgttccccggctgagggagattattaacgtggccaagaag atcaagacgccgtcgctgtatgttcacttgaagcctgaagtaagcaaggagaaggagagg gccaagaatgtgcagtgcgcgctcgagtacacgacgctgagaagtgtcacgcaggcgacg gagatttggtatgatccagatccgatgagcaccatcattgaggaggacgtggagtttgtc aagtcttactacgagatgccagacgaagatgtcactccggacaagatctctccctggcta ctgcgtatcgagctcaatcgcgagatgatggttgacaagaaactcagcatggcagacatc gccgagaagatcaacctcgagtttgtggacgacttgacgtgcatcttcaacgacgacaac gcagagaagctgatcctgcgggtccggatcatgaatgacgacgtcagcaagggtggcgaa gtagaccagtcggacgacgacgtcttcctgaagaagatcgagagcaacatgctcacggag atggcgttgcgagggatccctgacatccacaaggtgtttatcagggagcacaaaaggcag aggtttgacgagcatgagggcttcaagaccgagaccgagtggatgctcgacaccgagggc gtcaacatgctggctgttatgtgcaacgaagacgtggacgcgacgaggacggtcagcaac catctgatcgaagtcattgaggtgctgggcatcgaggccgtcaggcaagctctcctcaag gagctcagggaagtcatatccttcgacggctcctacgtcaactacaggcacctggccatc ctgtgcgacgtcatgacttaccggggccacctcatggcgatcactcgccacggtatcaac cgcaacgacacgggcccgatgatgcgctgctcgttcgaagagacggtggacatcctccta gatgcggcggtgtttgccgaggcggaccatctcaggggcgtcaccgaaaacatcatgctc gggcagctagctcccatcgggacgggcgacttcgggctgctgctcaacgacaagatgctg gagcacgcgatcgagctgcagctcccgagctacatggagacggccgactttggcctgggg ggcgtgactggaactccgcaccacgaagggatgatgtccccgagctatctgctgagtccc aacttgcgagcctcgccgatcacggacgcacagttttcgccgtatgttggtggcatcaca ttctctccgggagcttacagcccgctttcgccagcgtacagccctgcggggtacagcccg gcttctccaaactacagcccctcgtcgccgacttacagtccatcatcgccagcttacagt ccggcctctccggcgtacagcccgagctctccaggctacagcccggcatcgcccgcgtac tctccaacgagtccatcttacagtccgacgtcgccgagctacagtcccacttcaccgtcc tactctccaacctctccatcgtactctccaacttcgccgtcttactccccgacctctcca tcgtactctccaacctcgccatcttactctccgacgtctccttcctattctcccacttcg ccatcttattctcccacttctccgtcctacagtcccacttctccctcgtactctcccacc tcgccgtcctacagcccgacgtctccctcgtactccccaacctcgccatcctactctccc acttcgccttcttacagtccgacgtctccgagctatagcccgacgtccccgagctacagc ccgacctctccgagctacagcccgacgtctccgtcttacagcccgacgtcaccggcttac agcccgacttctccgtcttacagcccgacgtcgccttcttacagcccgacttctccttcc tacagcccgacttcgcctgcttatagtccgacgtcgccggcatacagtccctcgtctcac acttacagtcccagcagtctcaagtatagctccgcgagcccaagctacaggtaa

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