Selaginella moellendorffii: SELMODRAFT_129323
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Entry
SELMODRAFT_129323 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_129323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_129323
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_129323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
9629822
NCBI-ProteinID:
XP_002989172
JGI:
129323
UniProt:
D8T0M2
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MRFVLSLFYHRCVDSFSFILHRKPVPTSDKRLEVPLVPGTKRVRDDFSRETFDESKRKKL
LEALGDDEGSKQGAWAEAQAKFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSA
SQRQYWTTKCHYMDIVLFFKVGKFYELYELDAEIGHKELDWKMTISGVGKCRQVGVPESG
IEDAVQKLVARGYKIGRMEQVETSEQAKAKRGPNAMVERKLVQVVTPSTLTDGIMKPEAI
HLLAVKEVLENSGPSAVIYGFAFADAAGGLCYVGSFCDNDAYSALDALVMQIAPQEVLYE
IGGLSPGALKVFQRYIRPGSLPLVLTPLQPGADFPEPATVLELISSRGYFQECVKCSGQQ
PGFPGVLDTVDHKDAAMTALGALVSHLHRIKMDAEIYNGVLCAYELYWGFMRLDGQTIAN
LELLANTANGGKAGTLMGYLDSCATAFAKRLLRRWICHPLQDTKAINHRLDSVEELLCNP
ECAAELRALLRKVPDLERLSARLRGFSDSSFAEVLLPLAKQAFQRRLKTLCLAVSGLLRA
YQVLECLRQMPAKARLLRRACKLLKVKSSIECLWSMEPKLDMEKQSLNTDQDEDEETQRK
TLSWMILEFNKHQRHWTAIVDALSYIDVLISFAAAKRAAEGPTCRPTFVAADQGVAVLEM
QGLWHPFAAAGMGGTFVPNDIALGLGKPRAILLTGPNMGGKSTLLRATCVATLMAQLGCY
VPSESCTLSLVDTIFTRIGARDRIMSGESTFMVECAEAGSILCNATSNSLVVLDELGRGT
STFDGYAIAYAVFRHLVEAVGCRLVFATHYHPLTQEFSGHPSVSLQHMACSFDSSSSDRQ
LAFLYKLRAGASSASYGLQVALLAGIPASVVDAARGASELIAPRLRGFSSSGMLNCWLRR
VCSTAMDSGSIAGAQEDYKSLLGLWSELQTAL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgttttatctctgttttatcaccgatgcgttgatagtttttctttcattctt
cacaggaagccagtgcctacttccgataaaagattggaagttcctttggtgcccggtact
aagcgcgttcgtgacgatttctcgagagaaacctttgatgagagcaaacgcaagaaattg
ctggaagctcttggtgacgacgaaggctcgaagcaaggtgcttgggcagaagctcaagcc
aagtttgagtggatgcaaccatcaaacattcgcgatggaaatggaaggaatcacagtgat
cccttgttcgacgtcaggaccgtccacattccagagaacgtgctcaagaaaatgtccgca
tcgcagaggcagtattggacaaccaaatgccactacatggatattgttctttttttcaaa
gtggggaagttttacgagctttatgaactagatgctgagatcgggcacaaagagctcgac
tggaaaatgacaatcagtggagttggaaagtgtagacaggttggagtgcctgagagtgga
attgaagacgctgttcagaagcttgtggctcggggctacaaaatcggacgaatggaacaa
gtagaaacttcagagcaagccaaggctaaaagaggtccaaatgccatggtagagagaaag
cttgttcaggtagtcacgccttcaacactcacggacgggataatgaaaccggaagccatt
cacttgctagcagtgaaagaggtactggaaaactctgggccaagcgctgtaatttatggg
tttgctttcgctgacgctgccggtggtctttgctatgtcggctcattctgtgataatgat
gcgtattctgccttggatgcgctcgtcatgcagatagcacctcaagaggtgctttacgaa
ataggaggtctctcgccaggtgccttaaaagtgtttcaacgctatattcgtcctgggtct
ttaccactggttcttacacctttgcaaccaggtgctgacttccctgagccagccactgtt
ttagagctgattagctctcgtggatatttccaagagtgcgtcaagtgctctgggcaacag
cctggctttccaggagttctcgacactgttgatcataaagacgctgctatgaccgcattg
ggagctctcgtatctcatttacacaggatcaagatggacgcggagatatataatggtgtt
ctctgtgcgtatgaactatattggggctttatgaggcttgacggtcagacaatagccaac
ttagagttgcttgcaaacacagccaacggaggcaaggctggtaccctcatgggatacctt
gacagctgcgcaactgctttcgcaaaacgtcttcttcgacgttggatttgccatccactt
caagacaccaaagctataaatcatcgtctagattcagtcgaggagcttctgtgcaatccc
gaatgtgctgctgagttgcgagcattactccggaaggtgccagatctggagcgactcagt
gcccgcttacggggattttctgatagttctttcgctgaagtgttactacctcttgcaaaa
caggcatttcagcggaggttgaagacattgtgccttgctgtttcgggacttctgcgtgct
taccaggtcctcgagtgccttaggcagatgcccgcgaaggcacgtcttctacgtcgagct
tgtaagctattaaaggtgaagagcagcatcgaatgtctgtggagcatggaaccaaagctc
gacatggagaaacagtctttgaacacagaccaggacgaggacgaggaaacgcaaagaaag
actttgagctggatgatactcgagtttaacaagcatcagcgccattggacagccatcgtt
gatgcattgagctacatcgacgtgctaatatctttcgcagccgctaaacgagcagcagaa
gggccgacatgccgtccgacgttcgttgctgctgatcaaggcgttgctgttttggaaatg
caaggcctatggcatccatttgcagcagcaggcatgggtgggactttcgtgccaaacgac
atagcactgggccttggtaagcctcgagcgatacttctcacaggaccaaacatgggcggg
aaatctacattgctcagagcaacgtgtgtggctactctcatggcacaacttggctgctat
gttccaagtgaatcgtgcacgctatccctcgtcgacaccatattcactcgtattggagct
cgtgatagaatcatgtctggcgagagcacattcatggtcgaatgcgcagaagctgggtcc
atcctctgcaatgcaactagcaactcgttggtggtactggacgagcttggccggggaacc
tccacttttgatggttacgctatagcttatgcggttttccggcatctggtggaagcagtg
ggatgcaggctagtgtttgcgacgcattaccacccgctgacacaggaattctctgggcat
ccatctgtgagcctccaacacatggcctgctcgtttgacagcagctctagcgacaggcaa
ctggcgttcttgtacaagctgagagccggtgccagttctgcaagctatggtctccaagtc
gctcttctcgccgggatcccggcctcggttgtcgacgctgcaaggggtgctagcgagctc
attgctccgcggctccgaggctttagcagcagtggcatgctaaactgctggctgcgacgg
gtttgctccacggccatggacagtggttccattgctggtgctcaagaagattacaagtcg
ttgctaggcctgtggagcgagctccaaaccgctctgtaa
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