Selaginella moellendorffii: SELMODRAFT_147622
Help
Entry
SELMODRAFT_147622 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00906
Carotenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SELMODRAFT_147622
Enzymes [BR:
smo01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
SELMODRAFT_147622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Trp_halogenase
FAD_binding_2
Thi4
NAD_binding_8
Pyr_redox_3
HI0933_like
FAD_oxidored
FAD_binding_3
GIDA
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
9642531
NCBI-ProteinID:
XP_002971295
JGI:
147622
UniProt:
D8RJD9
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MLLELVPERKKESLSYELPLFNPSRKGPLDLVVVGGGPAGLAVAARVSAAGLSVCCIDPC
PLSIWPNNYGVWVDEFEALDLLDCLDHTWASAVVYIDDGVKKFLQRPYGRVNRKRLKAKM
TEQCIANGVQFLATKVKNVVHDREKSRVACEDGTCLESALVLDATGFSKCLVQYDQPFNP
GYQVAYGIVAEVDSHPFDLDKMVFMDWRDSHLAGNPEMIRGNKKLPTFLYAMPFSSTKIF
LEETSLVARPGVPLKEIQKRMEVRLRHLGIHVKSIEEDEVCVIPMGGVLPVIPQRVLGIG
GTAGLVHPSTGYMVARTLAAAPVVADAIVRQLGSSRSSSSVTLLPDDLSAEVWADLWPIE
RKRQREFFCFGMDILLKLDLYATRRFFSAFFDLEPRLWQGFLSSRLYLPELVAFGLSLFA
HAPAKSRLEIMAKGTPALVTMVNNLITTKS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggagctcgtcccggagaggaagaaggagagcttgagctacgagctcccgcta
ttcaatccgtccaggaaagggcctctggatctggttgtggtgggcggagggcctgccggg
ctcgcagttgccgctcgagtgtccgccgccgggcttagcgtttgctgcatcgatccttgc
ccgctcagcatctggccgaataactatggcgtctgggtggacgagtttgaggcgctggat
ttgctcgattgcttggatcacacctgggcgagcgctgtggtttacatcgatgatggtgtc
aagaagttcttgcagcggccatatggacgcgtgaacaggaagcgattgaaagccaagatg
accgagcagtgcatcgctaatggcgtccagttcctggcaaccaaggtgaagaacgtagtg
catgacagagagaaatctcgcgtcgcgtgtgaggatggaacttgtctcgaaagcgcgttg
gttctcgacgcaaccgggttttcgaaatgcctcgtgcagtatgaccagcctttcaatcca
ggataccaggtggcttatgggattgtggccgaggtggactcgcatccatttgatctggac
aagatggtctttatggactggagagactcgcacttggctggaaatcctgagatgattcgt
ggcaacaagaagcttccaacttttctctacgccatgccgttctcgtcaaccaagatcttt
ctagaggagacttctctagtagcgagacccggcgtgcccctcaaagagatacaaaagaga
atggaggtacggctcaggcacctgggcattcacgtaaagagcatcgaagaggacgaagtc
tgcgtgattccaatgggaggtgttcttccggttattccacaaagagtcctgggcatcgga
ggtaccgcaggcctagttcatccatccactggttacatggttgcgagaacattagccgcg
gctccggtggtcgcagacgctatcgttcgccagctcggtagcagtagaagtagcagcagt
gtcacacttctccccgacgatttatcagctgaagtatgggccgatctctggccgatcgag
agaaagagacagcgggagtttttctgctttggcatggacatattactcaagctcgactta
tacgcgacgcggaggttttttagcgctttcttcgacttggagcctcggttatggcagggc
tttttgtcctcgcgcctttatcttccagagctcgtcgcgtttggtctgtcgctgttcgcg
cacgcaccggcaaaatcgagactagagataatggccaaaggaactccagcgcttgtcacg
atggtaaacaatttaatcaccacaaagagctaa
DBGET
integrated database retrieval system