Selaginella moellendorffii: SELMODRAFT_163064
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Entry
SELMODRAFT_163064 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
smo03013
Nucleocytoplasmic transport
smo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_163064
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_163064
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SELMODRAFT_163064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_163064
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_163064
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_163064
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_163064
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SELMODRAFT_163064
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SELMODRAFT_163064
Pre-60S particles
SELMODRAFT_163064
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SELMODRAFT_163064
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SELMODRAFT_163064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
DUF3385
Motif
Other DBs
NCBI-GeneID:
9640978
NCBI-ProteinID:
XP_002993418
JGI:
163064
UniProt:
D8TCV9
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MAEKLLDFGQPFDVPVLDATVAAFYGTGSKDERAAAEKILTQLRDHPETWRRVVDILQTS
QNLNSKFFALQVLECVIKYRWNILPVEQRDGIKNYVSDLIVKLSSDPVSFRDQRLYINKL
NVVLVQVLKHEWPVRWPRFIPDLVVAARSSETLCENCMLILKLLSEEVFDFSQGEMTQSK
IKELKQSLNSEFQLIHELCLYVLSASQKADLIRATLATLHAFLSWIPLGYIFESPLLDAL
LKIFPIATFRNLALQCLTEIGTLQFNQIYDNNFVRLYQIFITQLQAILPPGTNIPEAYEK
GANEDQAFIQNLAMFFTSFFKSHIEILEGSNQAPLLLGLDYLINISYVEDNEVFKVCLDY
WNYWIGHLFKVTMDTLSQPVGLQVDGIGSNRKELYAVPLSKLRLLMVSRMAKPEEVLIVE
DENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKLSKQLNGDEWTWNNL
NTLCWAIGSISGSMQEDQENRFLVTVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRF
LRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCRRKFVILQVGETEPFVCEL
LKLLPSIILDLENHQIHTFYEAVGSMIQAESDPYRREEYLRSLMELPNQKWAEIINQARQ
SVDFLKTQDVARAVLNILQTNTSAANSLGQPFLSQITLIYLDMLNVYRMYSELISSSIAG
GGPYASRTSYVKLLSRSVKQETLKLIETFIEKCEDLEMVAKQFVPAMMDPILGDYARNVA
DARESEVLSLFATIINKLTGSMIEDVPRIFEAVFACTLEMITKNFEDYPEHRLKFFSLLR
AIASHCFRALFSLSSQQLKLVMDSIIWAFRHTERNVAETGLNLLLEMLSNFQASEFCNQF
HQSYFLTIEQEIFAVLTDTFHKPGFKLHVLILRHLFCLVDSGVLTQPLWDVSVAGPTAYA
NNMLFVRDYTIKLLHSSFPNMTLSEVTMFVNGLFDNRNDLVGFKNHLRDFLIQSKKFSVQ
DNKDLYADEAAAQREAERQRMLSVPGLIAPNEIHDDMLDT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctgctcgactttgggcagccatttgatgtgccggttctcgacgccacc
gtcgctgccttttacgggacgggctccaaggatgagagagcagccgcggagaaaatcctc
acccagctgcgggaccatcccgagacgtggaggagggttgtggacatcctccagacctcc
cagaacctcaactccaagttctttgccctccaggtgctcgagtgcgtgatcaagtaccgc
tggaacatcttgcctgtagaacagcgagacgggatcaaaaactacgtctcggacctcatc
gtcaagctgtccagtgatccggtgtcgttccgagatcaacgcttatacatcaacaagcta
aatgtggtgcttgttcaggttttaaaacacgagtggccagttaggtggccgagattcatt
cccgacctcgtcgtggcggctagaagtagcgaaactctttgtgagaactgcatgctcatt
ttgaagctgctaagcgaggaggttttcgatttttctcaaggcgaaatgacccaaagcaaa
atcaaagagctaaagcagtcattgaacagcgagttccaactcattcacgagctttgtctc
tacgtgttatcggcatcacaaaaggctgatcttatacgcgcgacgttggctaccctgcac
gcttttttgtcatggatacctcttggctacatattcgaatctcccctgctcgacgcactg
ctgaagatcttccccattgcgacttttcggaaccttgctctgcaatgcctgacagagatc
ggtaccttgcaattcaaccaaatctacgacaacaactttgtgcgcctgtaccaaatcttc
ataacgcagcttcaggcaatccttccaccgggaacaaatattcctgaagcgtatgagaag
ggtgcgaacgaggatcaggcgttcattcagaatcttgcgatgttcttcacatcgttcttc
aagtcgcacatcgagattctggaaggttcgaatcaagcaccactgttgctgggactggat
tatctcatcaacatatcttacgtcgaagacaacgaggttttcaaggtgtgcttggactat
tggaattactggattggccacctgttcaaggttacaatggacacgctctctcaacctgtt
ggtttgcaagttgatggcataggctccaacagaaaagagctgtatgctgtgccactctcc
aaattgagactgctgatggtcagccgtatggccaagccggaggaggtcttgattgtagaa
gacgagaacgggaacattgtccgagagaccatgaaggacaacgacgtacttgttcaatat
aagataatgcgggagactctaatatatctctcccaccttgatcatgaagacacagaacag
cagatgctgaaaaagctatccaaacagcttaacggggacgagtggacatggaataacttg
aatactctctgttgggccatagggtcgatatctggttccatgcaagaggaccaggagaat
aggtttctggttactgttattagggaccttttaaacctctgtgaaataacgaaaggaaag
gacaacaaagccgttattgcaagtaatataatgtatgttgtgggacagtatcccagattt
ctgagagcccattggaagtttttaaaaactgttgtgaacaaactgtttgagtttatgcat
gagacccatcccggcgtccaggacatggcttgcgatacattcttgaagattgtccaaaaa
tgcaggaggaagtttgtcatcctgcaggtcggagagactgagcctttcgtttgcgagctc
ttaaagttgcttccaagtattattctagatcttgaaaatcatcagatccatactttttat
gaagcggtgggatctatgattcaagccgagtcagatccatacagacgggaagagtatcta
cggagcttaatggagctgcccaatcagaaatgggcggagataatcaaccaagcgcggcag
agtgtggattttttgaaaactcaggacgttgcgagggccgtgcttaacattttgcagaca
aacacgagtgctgcaaactcacttggacagccttttttatctcaaataactctaatttac
cttgatatgctcaacgtttacagaatgtatagcgaacttatttcaagcagtattgctgga
ggcggtccatacgcatctcgcacctcttacgtgaagcttttgagcagatctgtgaagcag
gagacgttgaaattgattgagacgtttatagagaaatgtgaagacctggaaatggttgca
aagcagtttgttccggcaatgatggatcccatacttggtgactatgctaggaacgttgcc
gatgcacgtgaatcggaagtgctatcgttgttcgctacgatcattaacaagcttaccggc
tctatgatcgaggacgtccctcggatatttgaagcagtctttgcatgcacgctagagatg
attaccaagaattttgaagattatccggaacaccgactgaagtttttctctttgcttcgg
gctatagcatcgcattgttttcgggcgcttttctctctctcgtctcagcaattgaagctt
gtgatggattcgataatctgggcgtttcggcatacagaacgaaatgttgccgaaacagga
ctgaacttgttgctggaaatgctctccaactttcaggcgtccgaattttgcaaccagttc
catcaaagctacttccttaccattgaacaggaaatatttgctgttctgaccgacacgttc
cataaacccggcttcaagcttcatgttctcattcttcggcatcttttctgcctggttgat
tccggagtgttgacgcaacctttgtgggacgtgagcgtagctggacctactgcttacgca
aacaacatgctttttgttcgtgactatactattaaactccttcactcctcgtttccgaac
atgacgctttcagaggtgacgatgttcgtgaacggtcttttcgacaacagaaacgacctg
gtcgggttcaagaaccatctacgggactttttgatccagtcgaagaagttttccgtccag
gacaacaaggacttgtatgcggacgaagcagcagcacagcgagaagcggagaggcaaaga
atgcttagcgtccccgggctgattgctcccaacgagatccacgacgacatgttggacacc
tga
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integrated database retrieval system
