Selaginella moellendorffii: SELMODRAFT_181800
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Entry
SELMODRAFT_181800 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00052
Galactose metabolism
smo00511
Other glycan degradation
smo00600
Sphingolipid metabolism
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SELMODRAFT_181800
09103 Lipid metabolism
00600 Sphingolipid metabolism
SELMODRAFT_181800
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SELMODRAFT_181800
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SELMODRAFT_181800
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Motif
Other DBs
NCBI-GeneID:
9653365
NCBI-ProteinID:
XP_002985504
JGI:
181800
UniProt:
D8SQD3
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MDAAGPSHRDWEDPAVFGKNKRNPHVPLYSHSSVQEAVDFWIARSQADRELANSAVWDDD
AVPAALDSARFWCEGASSLISLSGYWKFFLASKPESVPHWFYKNQFNDSSWKTLPVPSNW
QMHGYDTPIYTNVTYPFPFDPPLVPRENPTGCYRRSFVVPPEWAGRRVFLRFEAVDSAFY
AWVNGALIGYSQDSRLPSEFDITSLCTEKENILAVQVMRWSDGSYLEDQDHWWLSGIHRD
VILFSKPQVMISDYFVKTHLTRDLKQATVEVDVSIEGATKLTKEMVLRVSGFLFDPVESE
QQEPETIPTKVVDIISAHHGRTVLTISVDNPKLWSAEKPSLYTLVVVLEDNNGGTADCES
CRVGIRQVSAQPKGLLVNGQLVTICGFNRHEHHPRLGKTNVEACMARDIVLMKQHNVNAV
RNSHYPQHPRWYELCDLFGLYVVDEANIETHGYELIESTLRKHPAGEAMWTHALLDRFVN
MVERDKNHSCIIIWSLGNESGYGPAHDAMAGWAHCRDPTRLVQYEGGGSRTSATDIICPM
YMRVWDTVKIANDTSELRPVILCEYSHAMGNSNGNIYKYWQAIDTTYGLQGGFIWDWVDQ
GLIQTEGGSRRWAYGGDFGDTPNDLNFCVNGLVWPDRSPHPALEEVKYCYQPLGIHIDGD
EIEIWNKRSFTTSEDLAFEWSLSTDGSLLKSGSWNVPPIEPREKYRMPLKAGPWSSLCDD
ILGSDVTLTITATLAASTRWACAGQVVASQQCFLPSKQPYSLQTVKFSDPLSTDISTSTV
VVAIPQHSWELKFDRSTGRSSWRLGDMLLMSKGPLPCFWRAPTDNDKGGDKRSYAYRWKA
FGLDRLAITGTTGFQAKQLSSHLVLLEGVLFIEPESGSGDEKREISIRSKEDGTDWFKVS
VSYMIYSSGDFVAQYKVEANPKLPPLPRVGIVFSISNECNAAEWYGRGPFECYPDRKAAA
QLGIYKQKVSDLHAPYIVPGECGGRADVRWLAFKNVEGDAGLFAMPFQGSPPLQMSASNY
STEELDRATHEEELNAGQDIEVHLDHKHMGLGGDDSWSPCVHDEYLVLPRNYEFAVRFSP
LSLAASSQELYRQRLLPE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgctggaccttcgcatcgcgactgggaggatcccgcggtgttcggcaagaac
aagcgcaatcctcacgttccgctctactcgcattccagcgtccaagaggctgtggatttc
tggattgcgcgcagccaggccgatcgggagctcgccaattcagctgtgtgggacgacgat
gccgtcccagctgcgctcgatagcgccaggttttggtgtgagggagcctcgtctttgatc
tcactcagtggctattggaagtttttccttgcttccaagcccgagagtgtgccgcattgg
ttctacaagaatcaattcaatgacagcagctggaagacactgcccgttccatcgaattgg
cagatgcatggatacgacacgccaatctacaccaatgttacgtatccttttccttttgat
ccaccgctggtacctcgagaaaatccaactggatgctatcgaagatcatttgttgtcccc
cccgagtgggctggacgaagggtgtttttaagatttgaggccgtggattctgcgttttat
gcttgggtgaatggtgctcttattggctacagtcaggacagccgtcttccatccgaattt
gacataacaagcctctgcacagaaaaggaaaatattctagctgttcaagtgatgcgatgg
agtgatggatcgtatcttgaagaccaagaccactggtggctatctgggattcaccgagat
gtgatactgttttcaaagccgcaagtcatgatcagcgattattttgtgaaaactcatctt
accagagacctgaagcaggcaactgtagaggtggacgtgtcgattgaaggagcaactaaa
ctaacaaaagagatggttttacgcgtgagtggatttctttttgacccagtcgagagtgaa
cagcaggagcctgaaaccattcccactaaagtcgtggacattatctctgctcatcacgga
cgaacagtgctgacaatttctgtcgacaatccaaagctgtggtctgcagaaaagccaagc
ctgtacacactggtagtggtcttggaggataacaatggaggtactgctgattgcgaatcc
tgccgagttggaatccggcaggtttcagctcaaccaaaaggactgttggtgaatggtcaa
ctcgtgaccatatgcggtttcaacaggcatgaacatcacccacgcctgggaaagacaaac
gtggaagcatgtatggcgagggatatcgttctcatgaagcagcataatgtgaatgccgtc
agaaatagtcattatccgcagcatcctcgctggtatgagctgtgtgacctctttggactg
tacgtggtggacgaggcaaacattgaaactcatgggtatgagctcattgaatcgaccctt
cggaaacacccggctggcgaagcaatgtggacacacgcactacttgaccgctttgtcaac
atggttgaaagggataaaaaccattcgtgcatcatcatatggtctcttggtaatgaatcg
ggatacggaccagcgcatgatgccatggctggttgggctcattgtcgagatcccacgaga
ttagtgcagtatgaagggggtggctcaaggacgtctgcaacggatataatatgccccatg
tatatgcgtgtctgggacacagtgaagattgcgaacgacacttctgaacttcggcctgtt
attctatgcgagtattcgcatgccatgggaaatagcaacgggaacatttataagtactgg
caagctattgacaccacctatgggttgcagggtggctttatatgggattgggttgatcag
ggcctcatacaaacggaaggtggctcaagacgttgggcatatggtggtgattttggagat
acacccaatgatctcaatttttgtgtcaacggtctcgtctggccggacagatctccacat
ccagctcttgaagaggtgaaatattgctatcaacctttagggatacatattgatggcgat
gaaattgagatctggaacaaacgctcctttaccacttcagaagatctggcttttgaatgg
agtttatcaactgatggttcccttttgaaaagtggctcctggaatgtaccacctattgaa
cctagggagaagtacaggatgcctctaaaagctgggccttggtcttctctttgcgacgat
atattgggaagcgatgtgactttgactattacagctacacttgcagcatcaacgcgatgg
gcctgtgcaggacaggtcgttgcgtcacaacaatgttttttaccttcaaagcagccttat
tcattacagacagtcaagttttcggatcctttgtctactgatatttccacgagcacggtg
gtagtggcaatacctcagcatagttgggagcttaaatttgacagaagtactggacgctct
tcttggaggctgggggacatgcttttgatgtccaaagggcctctcccttgcttttggagg
gctccaacagacaatgacaaaggtggtgacaagagaagctacgcatatcgatggaaggca
ttcgggttagaccgcctagcaatcactgggacaactggttttcaggcgaagcagctgtct
tctcatttagttttgttggagggggtgcttttcatagaaccagaatcagggagcggggac
gaaaagagggagatatcaataagatcgaaggaagatgggacagactggttcaaggtttca
gtgagctacatgatttacagcagcggcgacttcgttgcacagtataaagttgaagcaaat
ccgaagcttccgccgttaccaagggtgggcatcgttttctctataagcaacgagtgcaat
gcagcggagtggtatggacgaggaccgttcgagtgctatcccgataggaaggcagctgct
caactgggaatctacaagcagaaggtgtctgacctccacgccccatatattgttcctggt
gagtgcggtggacgcgcagatgtgagatggctggctttcaagaatgttgagggagatgct
ggtctgtttgcgatgcctttccaaggaagtcctccattgcaaatgagtgccagcaactac
agtacagaggagctggatagagcaactcatgaagaagagctgaatgctggacaggacatt
gaggtgcaccttgatcacaagcacatgggtttaggtggcgatgatagttggagtccctgc
gtccacgatgagtacctcgtcttaccacgaaattacgagtttgcggtcaggttttcgccg
ttatctctagctgcgtcatcacaggagttataccgtcagcgactcttaccagagtaa
DBGET
integrated database retrieval system