Selaginella moellendorffii: SELMODRAFT_424158
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Entry
SELMODRAFT_424158 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_424158
Enzymes [BR:
smo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SELMODRAFT_424158
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SELMODRAFT_424158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
DUF6533
Motif
Other DBs
NCBI-GeneID:
9649092
NCBI-ProteinID:
XP_002985013
JGI:
424158
UniProt:
D8SP04
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MRSSGFKRSRSCQRHRSAANTAGETLKGHEARLLRRDALPSLDLPKVRKNKFVEIIPINV
GCLGACTYCKTKHARGHLGSYTVDTLVQRLKTVVSEGRDIGANIPALLRALVAALPHRQK
YNAPNLHLTASGGNGCHPCVYSFLHVLVQSGRDSVLEGMKREYTFSEFRKIVDTLTRLVP
EIHIATDIICGFPGETSEDFDRIMELIREYTFPQVHISQFYPRPGTPAALMKRVPTLEVK
KRSRSLTSLFESFTPYAGMEVGLSCTGPSWKQIPLLETMLRKSDASSDCLWEKFVGSGQA
NLPRWLVHKHSTLLLSRSTRVLYFTNRYTFLIQALDAWWEYGIYSSSKLCPLI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcctcagggtttaaaagatctcgaagctgtcagcgtcatcggagtgcagcaaat
acagcgggggagactttgaaaggccacgaggcccggctgcttcgacgggatgctttgccg
tctcttgatttgccaaaagttcgtaagaacaagtttgtcgagatcattcctatcaacgtt
ggctgcttgggtgcttgcacatactgcaagacgaagcatgctcgcgggcatcttggcagc
tacacagtagacacactagtgcaaagattgaaaaccgtggtgtctgaaggacgagacatt
ggagcaaatataccagcgcttctacgtgctttagttgccgcgcttcctcatagacagaag
tacaatgctccgaatctacatcttacagcatctggaggaaatggctgtcacccctgcgtg
tattcgttccttcatgttctggttcaatctggaagggactcggtgttggagggcatgaag
agggagtacacgttttccgagtttagaaaaattgtggatactctcacaagactagtcccg
gagattcatatcgctacagatattatctgtggatttccaggagaaacatcagaggatttt
gacaggatcatggaactaatacgagagtacacgttcccacaggtccacatatcacagttt
taccctcgaccaggaacaccggcggctctaatgaaacgggttccaacgctcgaagtgaag
aaacgaagccgttccttgacaagtctgttcgaatcattcactccttacgcaggaatggag
gttggcctgagctgtaccgggccttcttggaagcaaattccactcctggagacgatgctg
agaaagtcggatgcgagcagcgactgtctgtgggagaaattcgtcggctcaggtcaagcc
aacttaccaagatggctggtgcataagcacagcacgctactgttgtctcgaagcactcgc
gttttatatttcacgaacagatacacgtttctgattcaagccttggatgcatggtgggaa
tacgggatttacagctcttctaagctgtgtcctcttatatga
DBGET
integrated database retrieval system
