Selaginella moellendorffii: SELMODRAFT_427239
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Entry
SELMODRAFT_427239 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_427239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_427239
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SELMODRAFT_427239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
Flu_B_M2
Motif
Other DBs
NCBI-GeneID:
9638620
NCBI-ProteinID:
XP_002988604
JGI:
427239
UniProt:
D8SYZ5
LinkDB
All DBs
Position
Unknown
AA seq
2038 aa
AA seq
DB search
MPLFITDEELEQLGGDVAAVVRKADDVVRNQQVQLETEKARADAARINAEQTCALVEQKY
VALMDQVARLESEKAQLRLALENKSSEHAAAQARVHQLELELMKRDSDLETRELEISELH
KSRKTILDVVEKKNLELDEKNESSNQLLEKVLALTQEKSGLESRVHELMAELTRSRAQEA
RVTQEKDIFAEHNSWLAEELTTRSANLLEERNRNAQSEAELQTKNMEFERAAKEKEDALV
RSQARVKDLETEKHGLIEELRFVKEDAAVKEEHLSIEVTTASKLAELYKQSSEEWSKKAN
DFEGVIKALEAHLNQTKEELEEQIQKEVAAREASEKELSTAKENFEKRILELQQVKSIDK
GFLDLDADAGQLLLQHHNDSSEFHGVSGTALAATLLRDGWTLGTVYSKYQEATDAWRHER
HERNRCQALLDRVLHEIEEKAALILGERAEYTRMLDAYGIMEEKLKLSMSDQAALENSVR
ELKVRGWLSSVVAVLLKECLDIQKRFGVGGDDSNMDEASTAGALVPDKSSSDAVISDKLL
TFKDIHGLVEHNTKLRALARVLAEQNEKKEQELREEFESRLKGRIDEASEKVAMVLKRAE
EQAQIIESLQGTVGMYKRLYEEERGIRSTFAVTPGARSLDGDGRDVRSLMETSHDECRRQ
LNAALEQMKTVEGELSQTRHSLTSARVECARFEAEATFAKEKLASLTRESESQRLQTNSI
LERNVELSQSVTDYQRRLRESTQNVKRAEDEARRLSIEVSVLEREKALLESAEKRASQEV
SQLSDRVHRLQATLDTIETTNEVREGAWTAEKKKLEDDREWVDAKHKLELERNYARSITS
ERDKAMERREALGLELKEALAALSASETRAKVAEVRSLELEANLRRADEKIMAVVAGGKQ
ISGSEDMENNVLVTLQHAREELETLREELLASKTHVEQYKNIAQANEEALKKMEEAHSKF
KEEATKSKDIVDSELKILQKHLSEVESHSLEKEREDGQLNANREAELRNALKEVASLKNA
EALKEGAIQQAEERIKVLKEDLRKEHQRWREAQNNYERQVLLQADTIRELSAVNEQLANL
EQQENKYCEKAERAEAELESVKVTFFMEKASLDAHKADMEKRLQELDEQNRFLLDRLEAK
HITSAEKDRRASTSADVDDENHEEPELQRVVQYLRRAKEAADTEISLLKQERVRLCKQFE
AASRSAEEAQTKLRQHHENLRASVYTDEEFRALQAQVMETNILRGNNGQLQEEIKRVLDE
NKELQGRFQKLEEENESLKRTVTELQLELHARAQEVEVSKAETRRWEQRCTQMLEKYKSL
DVDDYERVKALLVQTQERIGSETSMWRETIAKYEQELALRTETQAELERRFQDAVKLEAS
LRAEVERNRKILTQTKRKYEKDREVMQKEIEELKSGKLPVHQEALEACQKESALRLEQAQ
RENVARYELAQREAIEKDSRIQTLEKTLEKERDKSKSKIDKDRTALMELLQKATTEKQRF
LEDLQAVKQENEQLRQLQQIQGAETSTTIINAEASSKTFSATVEQLNDMAAELTPAPVVA
APEHETSTTPPVANVPPPAVLAPASAPAPAPAPAPAPTPTPTPPPVPMHLSIVRPSVPFP
RAVQRPPSAPILDDKLRAMQALRASIIEKEKFQTQTRRSGRRIIRPRMETSSQSDSAAEA
VESSLDAAGEGTSEAEGETARVPDAVVENDMNALVAIPMEIAVPAGHKRTSSESLDTENI
QQQDSRNEVLPPLKKARNDEPATEPEVDAATTTAVEEPKLQELDEEQQELPSLEGADLAA
DIAAPQRRVRFSRPESLLDDFDGSGSKLKEKSPELQLAQGSSSGTADEPVIEISEPKSPV
MFEFQVDVEPEQKETTEAGEATGNENDNGMSLDVEDGEISLGTVEEAGTEGEFEMEDVKE
QEELGKDAGQETTSTEMAAETSFEQGEAAGMAEAERPNPGAVTGGVTTPPTGGLSGGTPP
APAVTSTTINLNERARERAKERKRSAASPSSPEALRNRVVRAPKTNKGGRGRGGRGNQ
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcatcaccgatgaggagctcgagcagctcggtggtgatgtagcggcggtg
gtgcgcaaggcggacgatgtcgtccgcaatcagcaggtccagcttgagacagagaaggct
cgggcggacgcggccagaatcaatgccgagcagacgtgcgcgctggtggagcaaaagtat
gtggcgcttatggatcaggtggctaggctggagagcgagaaggcgcagctccgcctggcg
ctggagaataaatcgtccgagcatgctgcagcccaggcgagagtgcatcagttggagctc
gagctgatgaaacgagacagcgatctcgagactagggagttggagattagtgagcttcac
aagtcgcggaaaacaatactggacgttgtcgagaagaagaacttggagttggatgagaag
aacgaatcctcaaatcaattgcttgagaaagtgcttgctctcacccaagagaagagtggg
ctagagagtagagttcacgaacttatggccgagctcacccgatcacgggcacaagaagct
cgagtaacacaggaaaaggatatttttgctgagcataattcctggcttgctgaagagctc
acaacgaggtctgccaacttgctggaagagcgaaaccgaaatgcacaatcggaggctgag
ttgcaaaccaagaatatggagtttgaaagggctgccaaggagaaagaagacgctctggta
cgaagtcaagctcgtgtgaaagatctggaaacggaaaaacatggattaattgaagaattg
cgatttgtcaaagaggatgctgccgttaaagaagaacatttatcaattgaagttaccact
gcatcaaagctggccgaactttataaacaaagttccgaggagtggtctaagaaagcaaac
gattttgaaggagttattaaagcgttggaggcgcatttgaatcaaactaaagaggagctt
gaagagcaaattcaaaaggaggtggctgctcgagaggcttctgaaaaggaactatccact
gcgaaagaaaactttgaaaagaggatacttgaattacagcaagtaaaaagtattgataaa
ggttttctagacctggatgcggatgccggccagctgctcttacagcatcacaatgattcg
tccgagtttcatggagtgtctggaacggctcttgcggccacacttctccgggatggatgg
acgcttgggactgtttacagcaaatatcaggaagctacagacgcctggcgacacgaacga
catgaaagaaaccgttgccaagctttattggatcgggttcttcatgagattgaggagaaa
gctgcattgattcttggagaacgagcggagtataccagaatgcttgatgcatacggaatt
atggaggagaaactgaaattgtctatgtccgaccaagcggctttggaaaattccgtcagg
gagttgaaagtccgtggctggctttcttctgtggttgcggttcttcttaaggagtgtcta
gatatccagaaacgttttggagttggaggtgatgattcaaatatggacgaggcttcaacg
gcgggtgctcttgtaccggataaaagttcttcggatgctgttatatcggataaactgttg
acgttcaaggatatccatggcttggtggagcacaacaccaagcttcgtgcccttgcacgt
gttctggcggaacaaaatgaaaagaaggagcaagaactaagagaagaatttgagtctcgc
ctcaaaggtcgaatagacgaagcatctgagaaagtagccatggtgctgaaaagggctgag
gagcaggctcaaattattgaatcgcttcagggaactgttgggatgtataaaagactctat
gaagaggagcgagggattcgttctacattcgcagtaacacctggagcacgttctttagat
ggtgatggacgggatgtaaggagcctaatggaaacgtcacatgatgaatgtcgtaggcag
ctcaatgctgctctggagcagatgaaaacagttgaaggggagttgagccaaaccaggcat
agtcttacttcggctcgtgttgaatgcgctcgattcgaggcggaggcaacctttgcaaag
gaaaagctggcgtcattgacgcgagagtctgaaagtcagcgattacaaacgaactcaata
ctcgagagaaacgtggagctttctcaatctgtaactgattaccagcgtaggctcagagaa
agcactcaaaacgtcaaaagagccgaagatgaagcaagaagactctcgatagaggtttct
gttcttgagcgcgagaaagctctgctggaatctgccgaaaaacgggcttctcaggaagta
tcgcagttgtccgatcgagtacatcgtttgcaggcaacactagataccattgaaactaca
aatgaagttcgcgagggagcctggacagcggaaaagaaaaaactggaggatgacagggaa
tgggtcgatgcgaagcataaactagaacttgagcgtaattatgcacgtagcattacatct
gaacgggacaaggccatggagcgcagagaggcattgggtctagaactcaaagaagcgctt
gcagcgttgtcagcatcagaaacacgtgcgaaggttgctgaggttcgcagtctggaactt
gaggccaacctcagaagggcagatgagaagattatggctgtcgttgccggtggaaagcaa
atttctggatcggaagatatggagaacaacgtactggtcacccttcaacatgctcgtgaa
gaactagaaacgcttagggaggagttacttgcctcaaaaacccacgttgagcagtataaa
aatattgcgcaagctaatgaagaggcgttaaagaagatggaggaggcacattcgaagttc
aaagaggaggccacgaaatcaaaggacattgtggactcagaattgaagatactgcagaag
catctttctgaggtggagtcgcattccctggaaaaggaaagagaagatgggcagcttaat
gctaatagagaagcggaacttcgaaacgctttgaaggaagtggcttctctaaagaacgcg
gaggcgctaaaagaaggcgcgatacagcaagcggaagagcgaattaaagttttgaaagag
gatctaagaaaagagcatcaacgttggcgggaagcccagaataattacgaaagacaggtt
ttgttgcaagcggatactattcgcgagctgagtgcggtgaatgagcaactagcgaacctc
gaacagcaggagaacaagtattgtgaaaaggccgaaagagcagaagcagaactggaatct
gtgaaagtaactttcttcatggagaaggcttcgctagatgcgcataaagctgatatggaa
aaacgtttgcaggagctcgatgaacagaatcgttttcttttggatcgcttggaagcgaag
catataacctcagccgagaaggaccgcagggcctcgacgagtgctgatgtggatgacgaa
aatcatgaggagcccgagctgcagcgtgtagtgcagtatttgcgaagagcaaaagaagcg
gcggatacggagatttctttacttaaacaagaacgagtccgtctatgtaaacagtttgag
gcagcatcccgttctgcggaagaagctcaaacgaaactacgtcaacatcatgaaaatctt
cgtgctagtgtgtatactgatgaggaatttcgggcgcttcaggcacaggttatggagacg
aatatcttgcgcggcaacaatgggcagcttcaggaggaaattaagagagtccttgatgag
aataaggaattgcaagggaggtttcaaaaacttgaagaggagaatgaatcccttaaaaga
actgtaacggaattgcaactcgaacttcacgcccgtgcacaagaagtggaagtctcaaaa
gccgaaactcgtcgctgggaacaaagatgtactcagatgttggagaagtacaagtctcta
gatgtcgatgattatgaaagagtgaaggctttgctggtacagacacaggaacgaattggc
tcagagacgtcgatgtggcgcgaaaccatcgcaaagtatgaacaggagcttgctctaaga
accgagactcaagcagaattagagcgaaggtttcaagatgctgtaaaattagaggcgtct
ctgagagccgaagtcgagagaaacaggaagatcttgacccaaacgaagcggaaatatgag
aaggacagagaagtgatgcaaaaagaaattgaagaactcaagtccggcaagttgccggtg
catcaagaagcgctcgaggcatgccaaaaggagtctgcattgcggttagaacaagctcaa
agagaaaacgttgcacgttacgagctagctcaacgagaggcgatcgagaaagactcaaga
attcaaacgctcgagaaaaccttggagaaagaaagggataaatcgaaatctaaaatcgat
aaagacaggacggctttgatggagctgctgcaaaaagcaaccacggaaaaacaacgattt
ctcgaagacctgcaggcagtgaaacaagaaaacgagcaactacgacagttgcagcaaatc
caaggagctgagactagcaccaccatcataaacgcggaggcgagctctaaaactttttct
gcgacagttgaacaactgaatgatatggctgccgagcttactccagcaccagttgtcgca
gcccctgagcacgaaacttctacaacaccaccagttgccaacgtgcctcctccggctgtg
ctagctccggcttcggctccagctccggctccggctccggctccggctccaactccgact
ccgactcctcctccagtccccatgcatctaagcatagtgaggccgtcggttccgttccca
agagctgtacaacggccgccatcagcacctattctggatgataagttgagggcaatgcaa
gcgcttcgtgcaagtatcatcgagaaagagaaattccaaacccaaactcgtcgctctggg
aggcgtataatccggcctaggatggagacttccagccaatccgactctgcagcggaagct
gtggaatcctcgttggacgcggctggcgaagggacttccgaggccgagggcgagactgct
cgagttcctgacgcggtggtggagaatgacatgaacgcactagtggcaatacctatggag
attgcggtgcctgctggtcacaagagaacgtcgtcagagagcttggacaccgagaacata
cagcagcaagactctagaaacgaagtcttgccacctttaaagaaggccaggaacgacgag
ccagccacagagccagaagtggacgctgctactacgactgcagtggaggaaccaaagctc
caggaacttgatgaagagcagcaggagttaccgtcgctggagggcgctgatcttgccgca
gacattgccgctcctcagaggcgggtccgtttctctcgtccggagtctttgctagatgac
tttgatggaagtggcagcaagctcaaggagaagtcgccagagctgcagctagcgcaggga
agttcttccgggacagcggacgagccagtcattgagatctctgagccgaagtcgcctgta
atgttcgagttccaagtggacgtggaaccggagcaaaaggagacaacagaggcaggagaa
gcgacgggtaacgagaacgacaacgggatgagtctagacgtggaagacggcgagatttca
cttggaactgtggaggaggctggaacagaaggagagtttgagatggaagacgtcaaagag
caggaagagcttggcaaagacgcaggtcaggagacgacttccaccgagatggcggccgag
acttctttcgagcaaggagaggctgccggaatggctgaagctgaaagaccaaacccagga
gcagtaacaggaggagtaacaacaccaccaacaggaggattgtcgggaggaacaccacca
gcaccagcagtgacaagcaccactataaacttgaacgagagggcccgggaaagagctaag
gagagaaagcggagtgctgcgtctccttcgtccccagaagcactgaggaaccgggttgtc
cgagcaccgaaaactaacaagggcggcagaggcaggggtggtagagggaaccagtga
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integrated database retrieval system
