KEGG   Selaginella moellendorffii: SELMODRAFT_447395
Entry
SELMODRAFT_447395 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_447395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_447395
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     SELMODRAFT_447395
SSDB
Motif
Pfam: RPC5 DUF4998 LpxC
Other DBs
NCBI-GeneID: 9638332
NCBI-ProteinID: XP_002988629
JGI: 447395
UniProt: D8SZ37
LinkDB
Position
Unknown
AA seq 625 aa
MDGAGSSVPEEVTMESVADIVEDGDTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYE
LEQRCEAVRVKHQHQKLEVDLQVDRFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGI
LQGNKLHLNPLHAIVQLRPSLSYLNEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPV
AFKVEIKKQETERQQQSRLMSYAHLKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANN
LIRFDMSRNEYMKKLVPGRAPSAAASQAVPGLGKEPLSKSYLDTLPLDKRLHAVLSQGRV
HVLQFERLMKLAPAGCTEEEVLDVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFV
KNRVVSRETLEQLRVSKEILREILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQ
RWTAGEKLISDRALAVQQMGSGKAMGAKPGSGLAASTGIPPRPSTSSSMAPETLAALPDA
LTQIFLKHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVD
TIATNINGVYFLTQLGDPTQDPFREVVIALLKQKSAGLQRSEIMEAFKLALRKMPSNQLY
QKIMKELCYTRGATWVLKTGDGRPS
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggatggagctggaagcagtgttccagaggaagtgacgatggaatcagtggccgatatt
gtggaggacggagatacagtggtgagagagatcgaggtccatattactcctacagccgat
ccagacaccaagttctatcttctccaatatcctcttcgaccgtattggagaccttacgag
ttggaacaacgatgcgaagcggttcgcgtgaagcaccaacaccagaaactcgaggttgat
ctccaagtcgatcggtttggagacaactatgatgacgccgcggacgaccatctccgaatc
gctaaacagacgttaacttctactcaaggcaacctctcgacgaactatgccattggaatt
ctgcaagggaacaagctccacttgaatccgttgcatgcgattgtccaacttcgtccgtcg
ttgagttatctgaacgaagctgatgagcagaagaaaaaaaatatcactcgcgttgaaagt
gatgacgagatgcccgacgctgaggaaggggctgctactgaaaagaaaccagagcctgtg
gcttttaaggtggaaataaagaaacaagagacagagcgtcagcagcaatctagattgatg
tcatacgcgcatctgaaacaacttgaggaggccgaggcgtggatcacacttgagccgcat
gggttagacagtcctgtaaccaaggaaatcaaaatgaaaatgaagtcctccgcaaacaat
ctcatccgcttcgacatgtctcggaatgaatatatgaagaaactggtccctggtcgtgcg
ccttcggctgcagcgtcacaagccgtgccagggctaggaaaagagcctctctcgaaaagc
tatttggatactttgccgctggacaagagattgcacgctgtcttgtctcagggtcgagta
catgtgctgcaattcgaaagacttatgaagctggctccggcaggttgcacggaggaggaa
gttctggatgttctccagaaaacagcttatctggtgcaaggctgctgggtggcaacgagt
aatatgcgctacacaggtggtcggtgtgcgattcgagactatatcctcctacagtttgtc
aagaaccgggtggtcagtcgtgaaactctcgagcaactcagggtctctaaggagattttg
cgggagatacttgttcctctcgcagtgcaaaacatcaagacaggcggctgggagttcatc
gaaagcacagacaagacttttatcaagcgtcataactccatcgccaaagatcagctccaa
cgctggactgcaggagagaagctcattagcgacagggctctagccgtccaacaaatgggg
tccggcaaggcaatgggtgctaagccaggcagcggccttgcagcaagcacaggcattcca
ccgaggccctcaacttcgtcgagcatggcaccggaaacgcttgctgctctaccggacgca
ctcacgcaaatctttctcaaacaccatgtgtgcacgctgcaattcatctgtcactgcctg
cgtgaatcggcaatcacaaaatctcaagcagacaacgttaaagtcgaggagaaggcctcg
gcagtagcagctgccaaaggagcgtcggcgccagtggccgaactaacagcaattgtggac
accattgcgacgaacatcaacggtgtttacttcctaactcagctcggagatcccactcaa
gacccttttagggaagtggtcatcgcgttactgaagcaaaagtccgctggcttgcaacga
tcagagatcatggaagcgtttaagctggcgttacgtaaaatgccgtcgaatcaactttac
caaaagataatgaaggaactttgctacacgagaggtgctacttgggtgctgaaaactggc
gatggtcgtccaagctag

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