Selaginella moellendorffii: SELMODRAFT_61474
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Entry
SELMODRAFT_61474 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00052
Galactose metabolism
smo00511
Other glycan degradation
smo00531
Glycosaminoglycan degradation
smo00600
Sphingolipid metabolism
smo00604
Glycosphingolipid biosynthesis - ganglio series
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SELMODRAFT_61474
09103 Lipid metabolism
00600 Sphingolipid metabolism
SELMODRAFT_61474
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
SELMODRAFT_61474
00604 Glycosphingolipid biosynthesis - ganglio series
SELMODRAFT_61474
00511 Other glycan degradation
SELMODRAFT_61474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_61474
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SELMODRAFT_61474
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_61474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
9640161
NCBI-ProteinID:
XP_002971424
JGI:
61474
UniProt:
D8RK50
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
SRSFSIENDAFYKDGEPFRILGGEIHYFRIVPEYWKDRIQRAKAMGLNTIQTYVPWNVHE
PSEGEFFFGDPVNLEAFLKLAQELEVLVMLRMGPYVCGEWDLGGFPSWLLSKQPQLKLRT
SDSSYLKLVDQWWNVLLPKLVPFLYSRGGPVIMLQVENEYGSFGSDKQYLHHLVSEAREY
LGNEIILYTTDGATEDALQRGTISRDDVYAAVDFPTGWDPVAAFALQKNYNSPGKSPALS
TEFYTGWLTHWGENLATTSPYVAAAELDKLLSANGSVVLYMAHGGSNFGFFSGANTGGKE
TIYQPDITSYDYDAPIGEGGDLGEKFWRFREVLSSYVNFPLPDPPQLPSRRNTGTVVLQK
LANLFQVLQSLSHEFYLQQAPVTMELLNQSFGFIVYRSRLPSHAKPGSILEIKKIHDRAQ
VYVGKSSQSLRLVGTLQRWSNSSLQLPDGSSAGMEIYILVENMGRINYGPFIFDQKGILS
SVILDNVPMLGWRAYTLSLADVAENQEVLINFAIHSKFFFLSLAAPHCDGPAFYAATFES
EAQMDTFISFKGWSKGVAFVNGFNLGRFWPDAGPQCSLYVPGPLLRQGENQLLILELENT
LLHNKTLQFLGQHDWTCGKN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
tccagaagtttttctatagaaaacgacgcgttttacaaggatggagagcccttccgcatt
ctgggtggtgaaatccactacttccggatcgttccagagtactggaaagaccggatccag
cgagcaaaagcaatgggtcttaacaccatccagacttacgttccttggaatgttcacgag
ccatcggaaggcgagttcttctttggcgatccggtgaacctcgaggcctttctaaagctc
gcacaagagctcgaagttttggtcatgcttcgcatgggaccatatgtttgtggagaatgg
gaccttggaggatttccttcgtggctactgtccaaacaaccacagctaaagctcaggact
tccgattcttcgtaccttaagctcgttgaccaatggtggaatgttcttcttcctaaactc
gttccatttctctactctcgtggtggtccagtgatcatgctacaggttgaaaacgagtat
ggatctttcggatctgacaagcagtatctccaccaccttgtcagcgaagctcgcgaatac
ttgggaaacgaaataatcctatacacgactgatggagctacagaggacgctctgcaacgg
ggtacaatatctagagacgatgtttatgctgctgtggattttcccaccggctgggatcct
gtagcagcatttgcactacaaaagaactacaactcccctggaaagtctcctgcattgtca
actgagttttacacgggctggcttactcactggggagaaaatctcgcaacaacaagcccg
tatgttgcagcagcagagctggacaagcttttgagtgctaatggttctgtcgtgctttat
atggctcacggaggctccaactttggatttttcagcggtgcaaatactggggggaaagaa
accatctatcagccggatatcacgtcctatgattatgacgcccccattggggaaggtgga
gatcttggagaaaagttttggagatttcgtgaagtgctctcgagctatgtcaactttcca
cttccagatccgccgcaacttccatcgagacgaaacactgggactgtcgtgctgcaaaag
ctcgcaaatcttttccaagtcctccagtctctcagtcatgaattctatcttcaacaagct
ccggtgaccatggagcttctcaaccagagttttggattcatcgtttatagatccagactc
ccgtctcatgcaaaaccaggatccatccttgaaataaagaagattcatgatcgagctcaa
gtttacgttggaaagagctctcaaagcctgagactcgtaggaacgctgcaaagatggtcc
aattcctcgctacaacttcctgatggatcatcggctggaatggaaatctacattttggtg
gaaaacatgggacgtatcaactatggaccattcatattcgaccaaaaggggattctttct
tccgttatccttgacaatgttccaatgcttggctggagagcttacactttaagcctcgca
gatgtcgctgaaaatcaagaggttttaatcaactttgccatacactcaaagtttttcttt
ctttctttggcagctccacattgtgatggccctgctttctatgctgccacgtttgagagt
gaagctcaaatggacactttcatctctttcaaaggctggagcaaaggggtggcgttcgtg
aatggtttcaaccttggtcgattttggccggatgctggcccgcaatgcagcctgtatgtt
cctggaccactgctaaggcaaggagaaaaccagcttttgattctagagctcgaaaacact
ctgctccacaacaaaacgctccagtttctcgggcagcacgactggacttgcggcaaaaac
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