Selaginella moellendorffii: SELMODRAFT_61485
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Entry
SELMODRAFT_61485 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00052
Galactose metabolism
smo00511
Other glycan degradation
smo00531
Glycosaminoglycan degradation
smo00600
Sphingolipid metabolism
smo00604
Glycosphingolipid biosynthesis - ganglio series
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SELMODRAFT_61485
09103 Lipid metabolism
00600 Sphingolipid metabolism
SELMODRAFT_61485
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
SELMODRAFT_61485
00604 Glycosphingolipid biosynthesis - ganglio series
SELMODRAFT_61485
00511 Other glycan degradation
SELMODRAFT_61485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_61485
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SELMODRAFT_61485
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_61485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
9652158
NCBI-ProteinID:
XP_002966066
JGI:
61485
UniProt:
D8R4K0
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
SRSFSIENDAFYKDGEPFRILGGEIHYFRIVPEYWKDRIQRAKAMGLNTIQTYVPWNVHE
PSEGEFFFGDPVNLEAFLKLAQELEVLVMLRMGPYVCGEWDLGGFPSWLLSKKPQLKLRT
SDSSYLKLVDQWWNVLLPKLVPFLYSRGGPLIMLQVENEYGSFGSDKQYLHHLVSDAREY
LGNEIILYTTDGATDDALQRGTISRDDVYAAVDFPTGWDPVAAFALQKNYNSPGKSPALS
TEFYTGWLTHWGENLATTSPYVAAAELDKLLSANGSVVLYMAHGGSNFGFFSGANTGGKE
TIYQPDITSYDYDAPIGEGGDLGEKFWRFREVLSSYVNFPLPDPPQLPSRRNTGTVVLQK
LANLFQVLQSLSHEFYLQQAPVAMELLNQSFGFIVYRSRLPSHAKPGSILEIKKIHDRAQ
VYVGKSSQSLRLVGTLQRWSNSSLQLPDGSSAGLEIYILVENMGRINYGPFIFDQKGILS
SVILDNVPMLGWRAYTLSLADVAENQEVLINFAIHSKFFFLSLAAPHCDGPAFYAATFES
EAQMDTFISFKGWSKGVAFVNGFNLGRFWPDAGPQCSLYVPGPLLRQGENQLLILELENT
LLHNKTLQFLGQHDWTCGKN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
tccagaagtttttctatagaaaacgacgcgttttacaaggatggagagcccttccgcatt
ctgggtggtgaaatccactacttccggatcgttccagagtactggaaagaccggatccag
cgagcaaaagcaatgggtcttaacaccatccagacttacgttccttggaatgttcacgag
ccatcggaaggcgagttcttctttggcgatccggtgaacctcgaggcctttctaaagctc
gcacaagagctcgaagttttggtcatgcttcgcatgggaccatatgtttgtggagaatgg
gaccttggaggatttccttcgtggctactgtccaaaaaaccacagttaaagctcaggact
tccgattcttcgtaccttaagctcgttgaccaatggtggaatgttcttcttcctaaactc
gttccatttctctactctcgtggtggtccactgatcatgctacaggttgaaaacgagtat
ggatctttcggatctgacaagcagtatctccaccaccttgtcagcgatgctcgcgaatac
ttgggaaacgaaataatcctatacacgactgatggagctacagatgacgctctgcaacgg
ggtacaatatctagagacgatgtttatgctgctgtggattttcccaccggctgggatcct
gtcgcagcatttgcactacaaaagaactacaactcccctggaaagtctcctgcattgtca
actgagttttacacgggctggcttactcactggggagaaaatctcgcaacaacaagcccg
tatgttgcagcggcagaactggacaagcttttgagtgctaatggttctgtcgtgctttat
atggctcacggaggctccaactttggatttttcagtggtgcaaatactggggggaaagaa
accatctatcagccggatatcacgtcttatgattatgacgcccccattggggaaggtgga
gatcttggagaaaagttttggagatttcgtgaagtgctctcgagctatgtcaactttcca
cttccagatcccccgcaacttccatcgagacgaaacactgggactgtggtgctgcaaaag
ctcgcaaatcttttccaagtcctccagtctctcagtcatgaattctatcttcaacaagct
ccagtggccatggagcttctcaaccagagttttggattcatcgtttatagatccagactc
ccgtctcatgcaaaaccaggatccatccttgaaataaagaagattcatgatcgagctcaa
gtttacgttggaaagagctctcaaagcctgagactcgtaggaacactgcaaagatggtcc
aattcctcgctacaacttcctgatggatcatcggcaggattggaaatctacattttggtg
gaaaacatgggacgtatcaactatggacccttcatattcgaccaaaaggggattctttct
tccgttatccttgacaatgttccaatgcttggctggagagcttacactttaagcctcgca
gatgtcgctgaaaatcaagaggttttaatcaactttgccatacactcaaagtttttcttt
ctttctttggcagctccacattgtgatggccctgctttctatgctgccacgtttgagagt
gaagctcaaatggacactttcatctctttcaaaggctggagcaaaggggtggcgttcgtg
aatggtttcaaccttggtcgattttggccggatgctggcccgcaatgctccctgtatgtt
cctggaccactgctaagacaaggagaaaaccagcttttgattctagagctcgagaacact
ctgctccacaacaaaacgctccagtttctcgggcagcacgactggacttgcggcaaaaat
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