Selaginella moellendorffii: SELMODRAFT_75793
Help
Entry
SELMODRAFT_75793 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
smo
Selaginella moellendorffii
Pathway
smo03020
RNA polymerase
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SELMODRAFT_75793
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_75793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_75793
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_75793
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_75793
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SELMODRAFT_75793
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SELMODRAFT_75793
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SELMODRAFT_75793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
9641495
NCBI-ProteinID:
XP_002960872
JGI:
75793
UniProt:
D8QQ74
LinkDB
All DBs
Position
Unknown
AA seq
177 aa
AA seq
DB search
MFFHIRLERNLQLHPRFFGPQLRDKLVEKLIHDVEGTCSGRHGFVVAVTGVDTIGKGLIR
DGTGYVTFPIHYQCVVFRPFKGEILEGVVTLVNKMGFFAEAGPVQIFVSNHLIPDDMSFQ
SGDVPCYETSDSSVRIQKDSEVRLKIVGTRVDATEIFCIGTIKDDFLGLIGDPTAGA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccatatccgcctcgagcgcaatctccagctccatccgcgattctttgggccg
cagctcagagacaagctcgtcgagaagctcatccacgacgtcgagggcacttgcagtgga
agacatggctttgttgttgccgtgaccggagtggacacgattggcaaaggactcattcgg
gacgggactggctacgtaacttttcccatacactaccagtgcgtagtcttccgccctttc
aaaggcgagattcttgaaggggtcgtgacgctggtcaataagatgggattcttcgcagaa
gccggaccagtccagattttcgtctcaaaccaccttattccagatgacatgtcctttcag
tccggcgatgtaccctgctacgaaacatctgatagctcggtccgaatacaaaaggacagc
gaggtgcgccttaaaatcgttggaactcgtgtagacgccactgaaattttctgcatcggg
acgatcaaggacgatttcctgggccttatcggcgatccaacagcaggagcttaa
DBGET
integrated database retrieval system