KEGG   Selaginella moellendorffii: SELMODRAFT_75793
Entry
SELMODRAFT_75793  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_75793
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_75793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_75793
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_75793
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_75793
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SELMODRAFT_75793
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_75793
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SELMODRAFT_75793
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 9641495
NCBI-ProteinID: XP_002960872
JGI: 75793
UniProt: D8QQ74
LinkDB
Position
Unknown
AA seq 177 aa
MFFHIRLERNLQLHPRFFGPQLRDKLVEKLIHDVEGTCSGRHGFVVAVTGVDTIGKGLIR
DGTGYVTFPIHYQCVVFRPFKGEILEGVVTLVNKMGFFAEAGPVQIFVSNHLIPDDMSFQ
SGDVPCYETSDSSVRIQKDSEVRLKIVGTRVDATEIFCIGTIKDDFLGLIGDPTAGA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccatatccgcctcgagcgcaatctccagctccatccgcgattctttgggccg
cagctcagagacaagctcgtcgagaagctcatccacgacgtcgagggcacttgcagtgga
agacatggctttgttgttgccgtgaccggagtggacacgattggcaaaggactcattcgg
gacgggactggctacgtaacttttcccatacactaccagtgcgtagtcttccgccctttc
aaaggcgagattcttgaaggggtcgtgacgctggtcaataagatgggattcttcgcagaa
gccggaccagtccagattttcgtctcaaaccaccttattccagatgacatgtcctttcag
tccggcgatgtaccctgctacgaaacatctgatagctcggtccgaatacaaaaggacagc
gaggtgcgccttaaaatcgttggaactcgtgtagacgccactgaaattttctgcatcggg
acgatcaaggacgatttcctgggccttatcggcgatccaacagcaggagcttaa

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