Selaginella moellendorffii: SELMODRAFT_99885
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Entry
SELMODRAFT_99885 CDS
T01496
Symbol
SmABCB16
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_99885 (SmABCB16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_99885 (SmABCB16)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_99885 (SmABCB16)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_99885 (SmABCB16)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_99885 (SmABCB16)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_99885 (SmABCB16)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_99885 (SmABCB16)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_99885 (SmABCB16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_21
AAA_22
AAA_15
APS_kinase
DUF87
nSTAND1
AAA_28
SRP54
DUF1176
Motif
Other DBs
NCBI-GeneID:
9642145
NCBI-ProteinID:
XP_002973517
JGI:
99885
UniProt:
D8RR38
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MVVLAQADEKRHTSAYAVPFLDLFKHADAFDFLLIAAGSLGAIANGLAIPAMILTRGHII
DSFGRPQLQASQIKDQIFANAQVFVYIALGAWIASYLELSCWMRAGERQAKRIRTAYLRS
VLRQNVAYFDTNVTTGDVVNSISTDAFLVQEAISEKTGSFIRNATQFLGCYLVGFTQAWR
LSLVVLPFTPLLIMPGMLYGKAVTRFEVRKKSAYSKAGSLVEQTVASIRTVFSFVAEDKI
LKSYSQLLEATVHLGVKQGYAKGLALGSGGIAFAIWSFMTWYGSVLVMRRQANGAEIITT
GLALLNGARSLGFAAANIRTFSEGRVAAHKIYETIARVPPIDVDDENGEQLTNVAGKLDF
RNVLHSYPARPGVQVLQELNLSIPPGKTIALVGGSGSGKSTVIALLERFYDPLQGQVLLD
GYDIRSLQLKWYRKQIGLVSQEPALFATSIKENILYGKEDADFDEILEASNAANAHSFIM
QFPNAYDTQVGERGAKLSGGQKQRIAIARALVKNPPILLLDEATSALDTESEATVQAALD
KASLGRTTVIVAHRLSTIQTADLIAVLHSGKVIELGTHDELVSKGKEGAYSALLYLQGKP
GIDTTTPESPPSPKVSSQQAIPEQLKQNDGGSDNSPKSTLWDLLISLTRGKRTDGALGLV
GGVGFGFVQPSYSLLIGSMLTVYYTKNREELKEAVSLCSMLFAAIAAAAFTVNLLQHYCL
AVVGEHLTKQVRVKMLTSILSFEVGWFDKDENSSGMICSRLATDANMIRSLVTDRVSLLV
QTASAVAVSFIIVLFVNWRMGLLVIGIQPLLVFCYYVKLVFLKGFAKKAAKAQNEATQIA
TEAVSQHRTVAALSAQDKVVSSMKTMLDATTKDAKKQSHIAGFGLGVANFVLYASWALQF
WYGGVLLTQGKATLQDVFKVFFVFLSTGRVLAEALSLAPDLAKGSAVIESVLSILNRKTE
INADDTNSAKVGRIEGEVELCNVDFAYPSRPEMMVFKSFNLRVEAGKSVALVGQSGSGKS
TIIGLIQRFYDPLQGMVMIDGRDIRTLHLRSLRRQLALVGQEPVLLAASIRDNIAFGQES
CSEQEIIHASSIANAHTFISSLPDAYNTAVGERGAQLSGGQRQRIAIARAILRNPAILLL
DEATSALDAESERLVQDALSKTIIGRTTVTIAHRLSTIKSCDSIAVIQSGRVVEIGSHEE
LLGRGEEGAYSSLLRMQT
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcctggcgcaagccgacgagaagcgccatacttctgcgtatgccgttccattc
ttggatctcttcaagcacgcggatgcattcgattttcttctcatcgccgcaggcagcctg
ggagccattgccaatggactcgccatccctgcaatgattctcacacggggtcatatcatc
gacagctttggaaggccacagctgcaagcttcgcaaatcaaagaccagatatttgcgaac
gctcaagtcttcgtgtatatcgcactgggggcatggatcgcgtcgtacctagagttgagt
tgctggatgagagctggagagcgccaagccaaaaggatccggacggcttacctcagatcc
gtcctacggcagaatgtagcttattttgacacgaatgtcaccaccggtgacgtcgtcaac
agcatctccactgacgcctttctcgtccaggaagcgattagtgagaagacggggagcttt
atccgaaatgcgactcagttcctcggctgctacttagtcggcttcacccaggcgtggagg
ctctcactcgtagtgctgccttttactccgttgcttatcatgcctgggatgctctacggg
aaagcggtaacacgatttgaagtgcgaaagaaatccgcttacagcaaagcaggcagcttg
gtggagcaaacagtagcttcgattcgaacagtgttctccttcgttgcagaagacaagatt
ctcaaaagttactctcaattgctggaagcgacagttcacctgggagtgaagcagggatat
gcgaaaggcttggcactgggatccggaggaatagcattcgcaatatggtcctttatgaca
tggtatggaagtgttctcgtcatgcgccggcaggctaacggtgctgagattattacaacc
ggccttgctctgctcaacggtgcaaggtcgttgggatttgctgctgcgaacataagaaca
ttctcggaagggcgggtcgcagctcacaaaatatatgaaacaattgcacgagtcccacca
attgacgttgacgatgaaaatggcgaacagctcacaaacgttgccgggaaactggacttc
agaaatgttctgcacagctatccagccaggcctggggtgcaagtcctacaagaattgaac
ttaagcataccaccaggaaaaacgattgcactggttggtggcagtggatccggtaagtcg
acggtaatagcactgttggagcgcttctacgatcctctgcaaggacaagttcttttagac
gggtacgacatcaggtccttgcagttgaaatggtatcgtaagcaaattggacttgtgagc
caagagcctgctttgtttgctacttccatcaaggaaaatatcttatacggaaaggaagat
gctgatttcgacgaaatccttgaggcatctaatgcagccaacgcacacagttttataatg
caatttccaaatgcttacgacacacaggtcggtgagcgtggagcaaagctctctggagga
cagaagcaaagaattgctattgcgagagcactagtaaaaaacccacctatattactccta
gatgaagcaacaagtgcattggatacggaatcagaagcaacagttcaagcagcactggac
aaagcaagcctgggacgtaccacagtgattgtcgctcacaggttgtctacgattcagact
gccgatttgattgctgtcctgcattccggaaaagtcatcgagttaggaacacacgacgaa
ctggtctcgaaaggcaaagagggagcctactcagcactcctttacttacaaggcaaacct
ggaattgataccacgacaccagagtcacctccaagtcccaaagtatctagccaacaagcc
attccagagcagctgaaacaaaatgacggaggatcagataactcaccaaaatcaactttg
tgggatctattgatatctcttacccgaggcaagcggacagacggagcactggggttggtt
ggaggagtgggtttcggattcgtccagccttcttattcactccttatcggctccatgttg
acagtctactacacgaaaaaccgagaggaactgaaggaggcagtatctttgtgcagcatg
ctgtttgcggctatcgcagcagcggccttcaccgttaatctcctgcaacattactgtctt
gcagtagtgggtgaacatcttacaaagcaagtgagggtcaaaatgcttacgtcgatatta
agtttcgaagttggatggtttgataaggacgagaacagcagcggcatgatctgctcccgc
ctggcaacagatgcaaacatgattcggagtctcgtcactgatcgagtgtcgttgcttgtt
caaacggccagtgcagtggcggtgagctttatcatagtactttttgtcaactggagaatg
ggcctgcttgtcatcggtatacagcccctccttgtcttctgctactacgtaaaactggtg
ttcttgaaaggctttgccaagaaagctgccaaagcacaaaatgaggctactcagattgca
acagaggcggtgtctcaacacagaactgtggcagctctatctgcacaagacaaagtcgtg
agctctatgaagacgatgcttgatgcaacaacaaaagacgcaaagaaacagtcccacatt
gctggctttggccttggagtcgcaaacttcgtcctctatgcgtcttgggcccttcagttc
tggtatggaggggtgctactgacccagggaaaggcaaccttgcaggacgttttcaaggtg
ttcttcgtgttcttgagcactggccgggtcttggccgaggctctcagcttagcaccggac
ttggccaaaggatctgcagtcatcgagtcagtgcttagcattctaaacaggaagacagag
atcaacgcggacgacacgaattctgccaaagttggcagaatcgaaggagaggtggaactt
tgcaatgtggactttgcatacccatcgagaccggagatgatggttttcaagagcttcaac
ttgcgagtagaggcggggaaatctgtggcgctagtcggccaaagcggatccggaaaatcg
acaatcataggactcatacagcgattctacgatcccttgcaaggcatggtgatgatcgat
ggaagggatataagaacacttcacctgagatcactgagaaggcagcttgcactcgtcggc
caggagcccgtcctcttggcggccagcatccgcgacaacatcgcctttggccaggaatcc
tgcagcgagcaagagattatccacgcatcaagcatcgccaatgcccacacattcataagc
tccttgcccgatgcctacaacacggccgttggagagcgaggtgcgcagctctcgggaggg
cagcggcagcgaatcgccatagccagggcgatcctccggaaccccgcaatattgctcctg
gacgaggccaccagcgccctagacgcggaatccgagcgcctcgtccaggatgcgctgagc
aaaacgatcatcggccggacgacagtgacgatcgcgcacagactctccacgatcaagagc
tgtgacagcatcgcggtgatccaatcagggcgcgttgtagagatcggatctcacgaggag
cttctcggcagaggagaagagggcgcctactcgtccctccttaggatgcagacctaa
DBGET
integrated database retrieval system
