Sordaria macrospora: SMAC_00642
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Entry
SMAC_00642 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K09291
nucleoprotein TPR
Organism
smp
Sordaria macrospora
Pathway
smp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SMAC_00642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
SMAC_00642
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SMAC_00642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ADIP
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
10807272
NCBI-ProteinID:
XP_003349754
UniProt:
F7VMN8
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MAAAEVDVAYLSTQVGVPDSDLNTALTAPTPDLVKIIFAAIITKIRALEEDKFQLGIELE
GAIRSSESRCEQFKATTDKALKEVDELQTKRRSIENELQTLKSSGSASLSEIETLRARIA
SLETSNRETLAIVDSKTQAHARLAEELQDQHKKILKLNQEVTSLNQAVQTAQTAANSAKY
REEALKQELEQARRTNDWLDNELKTKNAEAIKFRKEKGARIAELQRLNDDANTTVESLTR
SEQVLRKRLQEAQEKAEEALTKVQQLQEAAARTEEDFKQELESAKRLVELKDQQSETHRN
RLKEVELRLEQIKDDHADEIRRIRRELEQEKEDHAQTEQRAQELQNQVDRIKASGDSRGR
SPGAGPQTPRGDGSFTAARAGSPFGTPLSIRGRAGQRATDALEELYNVKGQLAGEKRRCK
KLQEELDDAVAMLEAKMPEIDELNAESERLKNETIQMSQLLEQSYEERDLAVKTQRKAEA
LAATAQAEVKILRGQLRDLSTQVHVLCFNIHAKEKGLDKLTEEEAAKFERLKRGEVTENA
LDDMSDTHQYITEKFVAFKDIYELQEKNQELLRVVRDLADKMENEEARAEKQQAAQDHEE
VQQLRTVVTTLQDEVKSITVRMKSYMTERDMFRRMLQQRANPAEIRAALGEDVSQREVLA
SIEQNSAEDADLAAAYRELQAQYDSYRNDQTTEHKSLKEQIDKLSSEKGSLQAEIAKVSS
QLTLATERYSMLESNFKAAQSENQELQKRNQALSECGVKQDLRVQQIAEDLVDARGLAES
LRSENANLKAEKNLWKTIQERLSQDNESLAQEKARLNTLLTSQQSLLNERELSESETKRR
QQTQIDTLEAELSTTKRKLSEEMEESKKLQLRKEFDSQQYQKRIDELTAMISQVKEENVA
AKTTRDHLQARVGELEVELRNAQERADRLRPLPTPRAQPAEQGSTDDDSQARIEELENEV
QDLKNNIDLLNAQLENAKQQCDNFKQLSREMEEELTSANETQEQYRQQMDADLAAKDSRI
NELQQRVEGLTVELGNSNSELNTLRDSQADFARKFEDKERMLNSEIARLKDEEERYKEAF
KFHQQDLRAQAEIATKAQQDYEQELVRHAEAAKLLQQLREEHNQLRSHSAQWRAEAESAK
LSLAQSEQSWEERKQQLEQEITEIKARRDDLTAQNKLLHQQLDGVTSQISALQQSRSAMD
DSAEGTPISANDNAVEGLRELNNYLRREKEILEVQFDLKVQEAKRLQQQLEYSQSQLDEA
RLKLDQERRSQADSARNSLTHKELMDKLNELNLIRESNVTLRNENLRTQAQLAMKNRKIE
DLENKIQPLEARIGELELDKTFKEAEVKQLQEARDGLQKRIESILSKYGQADPQEVEQLK
ASVESLQAEREAFKQAEAALEEKLKEAETNLETERTNWKNMRARLAEDFKTRFGNRLSAV
EKDLESARQELVNLQTHNALLQEQHAQAAVAPAEQPVPAVAATPVEQDPQLQQQLDALRQ
ELESVNLQKATVETELEGLRAELATTITERDEARADVARLQASSNGTDTEMQDVETTHPA
SAPAPAQEDTGLSDEERKALEERIITAEAKAAEFEAKAKDLEERADAIVKQRSEKMKTAL
NKKLAESKEAMEKQTQEERQKLQAEYDLKLQQELAILKAEQASGVPQNGVPATPAKPPTA
QTAQTPIAGTPGSLPDLANLTDQQTRELISSNQVIMGIIKSNVKKNIAAESKKVREELET
TVKAEYEQKIASAKEQAAALTEKKSALRLNMLDRQLKTEKAKTAVVETAAKETPQKPVVE
VWEVAKVAKAPAPAPAPPAPTPATGQQPATPLNAGAVVVKSAPGEETKPQIPPTPANKAA
PAPARQGSIIAGQVIGNPFSQPGANQSPVATQPPANPFGAAPQQQQQPPATNPFGAQQQQ
QPGGQQPQGQQQQQQQGGQQFPGGHQQQQNQNQQGNRTGIPVARGGGNHARGGRGAYGAQ
GRGGQGQRGRGGFGGRGGANASQGGGMNPHAGEFQPGQQAAGNKRPRGDGEGGNQGGPKR
ARGGGNVGGGGGGAAAAGAGGGGNAGPGAGAA
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggtggacgtggcctatctttcgacccaggtcggcgtacctgattcc
gatctgaacaccgcccttaccgcgccgactccagacctggtcaagattatattcgctgcc
ataataactaagatccgtgctctcgaggaggacaagttccagctgggaattgagctggaa
ggcgccatccgaagctcagagtcgcgctgtgagcagttcaaggccaccaccgacaaggcc
ctcaaagaagttgacgagctccagaccaaacggcggtctatagagaacgagctacagacc
ctcaagtcctcgggatcggcctccctttccgaaatcgaaaccctccgtgcgcgtattgcc
tcgctcgagacttcgaaccgcgaaacccttgccattgtcgactccaagacccaggcccac
gctagactggccgaggagctccaggatcagcataagaagatcctcaagctcaaccaggag
gtcacatcgctcaatcaggctgtacaaaccgcacagactgccgccaattccgcaaagtat
cgtgaggaggccctgaagcaggaactggagcaggcgagacgcaccaacgactggctcgat
aacgagctcaagacaaagaatgccgaggcgatcaagttccgcaaggagaagggtgcccgc
atcgccgagctgcaacgcctaaacgacgacgccaacacgactgtcgaatctctcactaga
agcgagcaggttctccgcaagcgactccaggaggcacaagagaaggccgaggaggccttg
acaaaggtccagcaacttcaggaagccgctgcgcgtaccgaggaggatttcaagcaagag
ctcgaatccgccaagcgccttgttgagctcaaggatcaacagtccgagactcatcgtaat
cgcttgaaggaggtcgagttgagactggagcagatcaaggacgaccacgccgacgagatc
agacgcatcagacgtgagctcgagcaagaaaaggaggatcacgcacagacggagcagcgc
gcccaggagctgcagaatcaagttgaccgtatcaaggcgtccggtgattctcgcggtaga
tctcccggcgctggacctcaaactcccaggggtgacggctcctttaccgctgctcgtgcc
ggatctcccttcggtactccgctctccattcgcggtagagccggccagcgtgctactgat
gctcttgaggagctttacaatgtcaagggccagcttgctggcgagaagcgccgttgcaag
aagctgcaggaagaactggatgatgccgttgctatgctcgaagccaagatgcctgaaatc
gatgagctcaatgcagagtcggaacgcctcaagaacgagaccatccaaatgtcacaactc
ctggagcagtcatatgaggagcgtgaccttgccgtcaagacccagaggaaggccgaggca
cttgcggctacggcccaagccgaggtcaagattctccgtgggcagctgcgtgatttaagc
acgcaagtccatgttctctgcttcaatattcatgctaaggagaagggtctcgataagttg
acagaggaagaagccgccaagttcgagaggctcaagagaggcgaagttactgagaatgcc
ctggacgacatgtcggatactcaccagtacattaccgagaaattcgtcgctttcaaggac
atctacgagctgcaggagaagaaccaggagctcttgcgtgtggttcgtgaccttgcggat
aagatggagaacgaggaggccagggctgagaagcagcaagcagcgcaggatcatgaggag
gtccagcaacttcgtactgttgtcacgacccttcaggacgaggtcaagtcgattacggta
cgcatgaagagctacatgacagagagagacatgttccgtcgcatgctccaacaacgagcc
aatcctgccgagattcgcgctgccctgggcgaggatgtaagtcaacgtgaagttctcgct
agcatcgagcaaaactccgccgaagatgccgacctcgccgccgcctatagggagctacag
gcacagtacgactcttaccgaaacgaccaaacgactgaacacaagtctcttaaggagcaa
atcgacaagctgtcttcggagaagggctcacttcaggctgagattgctaaggtctccagc
cagcttacgctcgctacggaacgctacagcatgttggaatccaacttcaaggcagctcag
agtgagaatcaggagctacaaaagagaaaccaggccttgtccgagtgtggtgtcaagcaa
gacctgcgggtacagcaaattgctgaggatctggttgatgctcgtggcttggctgagagc
ctccgcagcgagaatgccaacctcaaggcggagaagaacctgtggaagacgatccaggag
cgcttgagccaagacaacgagagtcttgcacaggagaaggcaagacttaacaccctcttg
accagccaacaatcccttctcaatgagcgcgaactcagcgaatctgagacaaagcgcaga
caacaaacccagatcgacacccttgaggctgaactctccaccactaagcgcaagctttct
gaagagatggaggagagcaagaagcttcagctcaggaaagagttcgactcccaacaatat
cagaaacgcatcgatgagcttactgctatgatcagtcaggtcaaggaggagaatgtggct
gccaagactactcgcgatcatcttcaggctcgcgttggtgaacttgaggttgagcttcgt
aacgcgcaagaacgtgccgaccgtctccgtcccctgccgacacccagggcccagcctgct
gagcagggatctaccgatgatgattcccaggctcgtatcgaggagctcgagaatgaggtc
caggatcttaagaacaacatcgacttgctcaacgcgcagctggagaatgctaagcaacag
tgtgataacttcaagcagctcagccgcgagatggaggaagagcttacaagcgcgaacgag
acccaagagcaataccgacaacagatggatgcggatctcgcagccaaggacagcaggatc
aacgaactgcaacagcgtgttgaaggccttacggtcgagctgggcaattccaacagcgag
cttaacacgcttcgcgattcccaggctgatttcgcccgcaagtttgaagataaggagcgc
atgctcaacagtgaaatcgcgcgtttgaaggatgaggaggagagatataaggaagccttc
aagttccatcagcaagacttgcgggcccaggcagaaattgccaccaaggcccaacaggac
tatgagcaagaactcgtgagacatgcagaggcggctaagctgcttcagcagcttcgggaa
gagcataaccaactcaggagtcattctgctcaatggagggctgaggctgagtcggcaaag
ctttctcttgcacagagtgagcagtcttgggaggagcgcaaacagcagctcgaacaagag
atcactgagatcaaggcgaggagggacgacctcactgcgcagaacaagcttctacaccaa
cagcttgatggtgttacctctcagatcagcgctttgcagcaaagccgttccgcaatggat
gattccgccgaaggcacgccgatttctgccaacgataatgccgtggaaggtcttcgggaa
ctcaacaactacctgcgtcgcgagaaggagatccttgaggtacagttcgatctcaaggta
caagaagcgaagagacttcagcagcagctcgagtattctcagtcgcagctcgatgaagca
cgtctcaagctggatcaggaacgtcgctctcaagctgatagcgccagaaactcacttact
cacaaggagttgatggataagctgaacgagctcaacctgatccgtgagagcaatgtcacg
ctcaggaacgagaacctgcgaacccaggcacaactcgcgatgaagaaccggaagattgaa
gatctcgaaaacaaaattcaacctttggaagccaggattggtgagctcgagcttgacaag
acgtttaaggaggcggaagtcaagcaactgcaagaagcccgcgatggcctacagaagaga
atcgagtccatcctgagcaaatacggccaggctgatcctcaggaagtcgaacagctcaag
gcttcggtcgaaagcctgcaagctgagcgtgaagccttcaagcaagccgaagccgccctc
gaagagaagctcaaggaggctgagacgaacctggagactgagcggaccaactggaagaat
atgcgggcacgacttgcagaggacttcaagacgcgcttcgggaaccggctgtcggccgtc
gagaaggatctggagtctgccagacaggagctggtaaacttgcagacgcataacgcactg
cttcaggaacagcatgcgcaggccgcagtggcacctgcagagcagcccgttcctgccgtt
gccgctactcctgtagaacaagatccccagcttcagcagcagctggatgcgcttagacaa
gaactggagtcggtcaacttacagaaggccacagttgagaccgaactcgaaggtctcagg
gcggaactggccactacaatcactgagcgtgacgaagcccgcgcagatgttgcacgtcta
caagcttcttcgaacggtacggacacggagatgcaagacgttgagacgacccaccctgct
tctgccccggcaccagcacaagaggacaccggcctctcggatgaggagcggaaggcgttg
gaggagagaattatcaccgctgaggcgaaggctgccgagtttgaggccaaggccaaggac
ttggaagaacgcgccgatgccattgttaagcagcgttctgagaagatgaagactgcgctg
aacaagaagctggccgagtcgaaggaggccatggagaagcagactcaggaggagagacag
aagctgcaggctgagtacgacctcaagcttcaacaagagctcgccatcttgaaggccgag
caagcgagcggggtgcctcagaatggcgtgccggcgactccagcaaagcctcccactgcc
caaactgcacaaaccccaattgccggtactcctggtagtctcccggatctcgccaatctt
accgaccagcagactcgcgagctcattagctccaaccaggtgatcatgggtatcatcaag
agcaacgttaagaagaatattgccgccgagtcaaagaaggtgcgcgaggaattggagacg
accgtcaaggccgagtatgagcagaagattgcctctgctaaggagcaagcggccgctctg
actgagaagaaatctgccctgcggctcaacatgctcgaccgtcagctcaagaccgagaag
gccaagacggctgtcgtcgagaccgcggcaaaggaaacgccgcagaagcccgttgtcgaa
gtgtgggaagttgcaaaggttgctaaggcgcccgccccggctccggcaccaccggcgccc
acacctgccactggccagcaaccggcgacccccctgaacgccggtgctgtagtagtgaaa
tccgctcctggagaggagaccaagcctcagatccccccgaccccagccaacaaggcggca
cccgctccggccagacaaggctccatcatagctggacaggtcattggtaaccccttcagt
cagcctggagcgaatcaatccccagtggctacgcagccacctgccaatcctttcggtgcc
gcaccccagcagcaacagcaaccacctgccacaaaccccttcggtgctcaacagcagcaa
cagcctggcggtcaacagccacaagggcagcagcaacaacagcaacaaggtgggcagcag
ttccctggtggtcatcaacaacaacaaaaccagaaccaacagggtaaccgtaccggtatc
ccagtggctagaggaggcgggaaccacgctcgtggtggacgtggcgcatacggggcccag
ggccgcggcggtcaagggcagcgcggtcgcggtggcttcggtggacgcggcggagccaac
gccagtcaaggaggtggcatgaacccccatgctggcgagttccaacccggtcaacaagcc
gctggcaacaagaggcctagaggtgatggagagggaggtaaccagggaggacccaagaga
gctcgtggtggaggtaacgttggtggaggtggcggtggagctgccgcagcaggagcggga
ggaggtggaaatgcgggtcctggtgccggtgctgcttag
DBGET
integrated database retrieval system