Sordaria macrospora: SMAC_06162
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Entry
SMAC_06162 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
smp
Sordaria macrospora
Pathway
smp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMAC_06162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
SMAC_06162
Enzymes [BR:
smp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMAC_06162
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SMAC_06162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
TRM13
Motif
Other DBs
NCBI-GeneID:
10802193
NCBI-ProteinID:
XP_003344876
UniProt:
F7W681
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MGAERRAPIKEQLADQLPKRFRALQFGVQSHQDIVNQGVLEVSDNLLYDVENGRRTFPHG
PLDPRLGTSSKTGTCETCNLPLQSCAGHFGHVRLPLPVFHIGYLKYIQATLQNICKTCSK
VLLEEEPKAKFLKALRAPGIDNLKRSAILKKINDECRKQKTCPYCGDTQGVIRKLSVMKL
THDKFSHFNKSTAQKKVPPVAKAAFDSSFIQAKTFTPDLEKHSKKAMDDMDPLKVLKLFK
KITAEDCELLGLNPSEGRPEMFLWQYLPAPPICIRPSVQQEAASNEDDITSKLSEIILYA
GHLRESLLKGAALNTIMEQWEFIQLQVGMYVNSDVPGLYQPGFGKPIRGFCQRLKGKQGR
FRGNLSGKRVDFSGRTVISPDPNLGIDQVAVPERVAKNLTYPERVNRNNIEKLRKCVMNG
PKVWPGAQGVIKRDGGMKFNLNFGDESIREERARELKFGDVVERHLEDGDIVLFNRQPSL
HKLSIMSHRAKVRPWRTFRLNECVCTPYNADFDGDEMNLHLPQTEEARAEAINLMGDFIT
AAYLLSSKDLFLDRKTFTYICTQMLLGETHLDLPPPTIIKPVEMWTGKQIFNVLMRPNKQ
SPVLVNLEAKNKVYKAKPGELPDMDIDDCYLVKNSVFYVILRDWGPEHAAQAMNRLAKLC
ARTLTLRGFSIGVGDVYPSKDLTEHKAKLVADAYALCDDLIAQFKSGRLEKAPGCNMEET
LENKISGILSKVRSQAGDYCVGHLSRNNSPLIMAKSGSKGSDINVAQMVALVGQQIIGGK
RVADGFQDRTLFHFHKNARQPPSKGFVRNSFYTGLVPTEFLFHAISGREGLVDTAVKTAE
TGYMSRRLMKSLEDLSTQYDDTVRTSEGNIVQFQYGADRLDPADMEGNAKPVDFERSWNH
AESLTMNHNERSLLPAEISAMCREILDERRKSYVRKHLVTGELLHYADKTIAESNDHDVF
IAIDEHEGARVYLNTIQAEMDKRALKLAKARRLAGLDPCLDQNNADLLKEFAAWEKKQNG
GDIKMLDPEEEEIQQAHVDRVAKVSEATLRKFMNLCLSKFDKAKVEPGHAVGAVGAQSIG
EPGTQMTLKTFHFAGVAGMSITQGVPRIKEIIGASKLISTPVISCELENNVDIKAARIVK
GKIEKTFISDVIQYVEDVWLPDVAKIVLKIDMQALSDMQLGIGLREIMVAIVKAKKLKLK
VEMDDLKIGPDNTIEAARVRAAAIEKGQLLLTTSDETAADFQLRVNFLKRMLPAVPISGY
PEAFRAIIQSSESNEHKVLVEGYGLRACMTTEGVIGTKCISNSIMECRDVLGIEAARTTI
AKEIGSVMGDMGIDPRHMDLLADVMTYKGEILGITRHGLAKMRDSVLQLASFERTPDHLF
DAAAGMKTDRILGVSECIIMGQTMKIGTGAFQVVRRLGIRDHQVRPKKSMFEEVWKKDEA
EKRKAKMEMRKVAAGRMGEKIDGMMPAAPMVAVA
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgagcggagagctcctatcaaggagcagctggccgaccagctccccaagcgc
tttagggccttgcagttcggagtccagtcacaccaggatatagtaaatcagggtgttctc
gaagtctccgataaccttctctacgacgtcgaaaacggccgccgcactttcccccacggc
cccctcgatcctcgcctcggtacctcgagtaagaccggcacctgcgagacctgcaacctc
cctctccagtcctgcgctggtcacttcggtcacgtccgcctaccgcttcccgtcttccac
attggttatctcaagtacatccaggccacactccagaacatctgcaagacctgctccaag
gttctgcttgaagaggaacccaaggccaagttcctcaaggctctccgtgcccctggcatc
gacaacctcaagcgatcagccatccttaagaagatcaacgatgaatgccgcaagcaaaag
acgtgcccctactgcggcgacactcagggtgttatccgcaagttgagcgtaatgaagctc
acccacgacaagttctcccacttcaacaagtcgaccgcccagaaaaaggtcccgcccgta
gccaaggccgccttcgattcctccttcattcaggcaaagacattcactccggatcttgag
aagcactccaagaaagctatggacgacatggaccctctcaaggtcttgaaactgttcaag
aagatcacggccgaggactgcgagttgctcggattgaacccttccgagggcagacccgag
atgttcttgtggcaatatcttcccgctcctcccatctgcattcgcccgtcggtccagcaa
gaagccgctagtaacgaagatgacatcacgagtaagctgtccgaaatcattctttacgcc
ggccatctgcgagaatcgctcctcaagggcgccgccctcaacaccatcatggaacagtgg
gagttcatccagcttcaggtgggtatgtacgtcaacagtgacgttcccggcctgtaccag
ccaggatttggtaagcccattcgtggcttctgccagcgtctaaagggcaagcagggtcgt
ttccgtggtaacctgtcgggtaagcgtgtcgacttctccggccgcacagtcatttcaccc
gatcccaacttgggaattgatcaggtcgctgttcctgagcgcgtggccaagaacctgaca
tatcccgagcgggtaaaccgcaacaacatcgaaaagttgcgaaaatgcgtcatgaatgga
cccaaagtctggcctggtgctcagggtgtcatcaagcgggacggcggcatgaagttcaac
ctaaacttcggtgacgagtctatccgggaggaacgtgcgcgggaactcaagtttggcgac
gttgttgagagacatttggaagatggcgacattgtgctattcaaccgtcagccctcgcta
cacaagttgtctatcatgagccatcgtgcaaaggttagaccctggaggacgttccgtctc
aacgaatgtgtgtgcacgccctacaacgccgatttcgatggagacgaaatgaaccttcat
cttccgcaaacagaagaggctcgcgccgaagccatcaacctcatgggtgatttcattacc
gcagcgtacttgctcagtagcaaagatttgttcctcgaccgcaagacctttacctacatc
tgcacgcaaatgttgctgggcgaaacccatctcgaccttccgccgcccaccatcatcaag
cccgtcgagatgtggacgggtaagcaaatcttcaacgttctgatgcgccctaacaagcaa
tcaccggtccttgtcaacctggaggccaagaacaaggtttacaaggcgaagcctggtgag
ctcccagatatggacattgacgactgctacttggttaagaactcggtgttctacgtcatc
ctccgtgattggggtccggaacacgctgcgcaggccatgaaccgcctggccaagttgtgt
gctcgcacactgaccctccgcggtttctcgatcggtgttggcgatgtctatccgtccaag
gacttgacggagcacaaggccaagctggttgcggatgcgtatgcactctgcgacgacctt
atcgcccagttcaagagcggaaggcttgaaaaggctcccggttgtaacatggaggagacg
ctcgagaacaagatctccggcattctcagtaaagtccgttcgcaggccggtgactactgt
gtcggtcatttgagtcgcaacaattctcccttgatcatggccaagtccggttccaaaggt
tccgatatcaatgtcgcccagatggttgcccttgtcggacagcagattattggtggcaag
cgtgtcgcggatggtttccaagatcgtacgctcttccacttccacaagaacgctcgtcag
ccccccagtaagggtttcgtgcgcaacagtttctacaccggtctggttcccaccgagttc
cttttccacgccatctctggtagagaaggtctggtcgatactgccgtcaagacggccgaa
acgggttacatgtctcgtcgtctcatgaagtcattggaggatctctcgacccagtacgat
gataccgtgcggacgtcagaaggaaacattgtgcagttccagtacggtgccgacaggctg
gatcccgcagacatggagggtaacgccaagcctgttgatttcgagaggtcatggaatcat
gccgaaagcttgactatgaaccacaatgagaggtcgctgcttccggcagagatctcggcc
atgtgcagggagattctggacgagagacgaaaatcgtacgtgcgcaagcaccttgtcacg
ggcgagttgctgcactacgcggacaagacgattgcggaaagcaacgaccacgatgttttc
attgcgatcgatgagcacgagggtgccagagtctatctcaataccatccaggctgagatg
gacaagcgtgcgctcaagctggcgaaagcacgcaggctcgccggcttggatccctgcctg
gaccaaaacaacgctgacctgctgaaggaattcgctgcatgggagaagaagcagaatggc
ggcgatatcaagatgctagatccggaagaggaggagatccagcaagcccatgtggatcgt
gtcgccaaggtttcggaggccaccctgagaaagttcatgaacctctgtctttccaagttc
gacaaggcaaaggtcgagcccggtcacgccgtcggcgccgtcggcgcccagtctattggt
gaacccggtacccagatgacactaaagactttccatttcgccggtgtcgccggtatgagt
atcactcagggtgttccccgtatcaaggaaattattggcgcctcgaagctcatcagcacg
cccgtcatcagctgcgagctcgagaacaacgtagacatcaaggccgcgcgcatcgtcaag
ggtaagatcgagaagacttttatttccgatgttatccaatacgttgaggatgtctggctt
cccgatgtcgccaagatcgttctcaagatcgacatgcaggctctttcagacatgcagctc
ggcatcggtcttcgtgagatcatggtcgccatcgtcaaggccaagaagctcaaactcaag
gtggagatggacgacctgaagatcggccctgacaacaccattgaggcagcgagagttcgt
gccgccgccatcgagaagggccagttgctcctcactacgtcggacgagaccgccgccgac
ttccagctgcgcgtcaacttcctcaagcgcatgctccccgccgtgcccatctccggctac
cccgaggccttccgtgccatcatccaatccagcgagtcaaatgagcacaaggtcctggtt
gaaggctacggcctgcgcgcctgcatgaccaccgagggcgtcatcggaaccaagtgcatt
tctaactccatcatggagtgccgcgacgtactaggcatcgaagccgcgcgtaccaccatc
gccaaggaaatcggctccgtcatgggcgacatgggcatcgatccccgtcacatggacttg
ctggccgacgtcatgacctacaagggcgagattctcggtatcacacgccacggtctcgcc
aagatgcgcgacagtgtgctgcagctggcctcgttcgagcgcacgcccgatcacttgttc
gatgcggcggccggcatgaagacggatcgcatcctcggtgtgtcggagtgtatcatcatg
ggccagaccatgaagatcggtacgggcgcgttccaagttgttcgcaggttgggtatcagg
gatcatcaggtcagacccaagaagtccatgttcgaggaggtgtggaagaaggatgaggcc
gagaagaggaaggccaagatggagatgaggaaggttgcggcggggcgtatgggggaaaag
attgatggcatgatgccggcagcgcccatggtggctgtcgcctaa
DBGET
integrated database retrieval system