Skermanella mucosa: JL100_008530
Help
Entry
JL100_008530 CDS
T07652
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00330
Arginine and proline metabolism
smuc00480
Glutathione metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc04148
Efferocytosis
Module
smuc_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JL100_008530
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JL100_008530
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
JL100_008530
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
JL100_008530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UEM22777
LinkDB
All DBs
Position
SKMUc:1883251..1884501
Genome browser
AA seq
416 aa
AA seq
DB search
MSLPFTAPLAAHEHATHEHTAYEDAAAMVAALRPEQPVYCIRPHVLREAARHFVETFPGK
VLYAVKCNAEPAFLDALYEGGIRHFDTASLPEIAVVAERFADTTSYFMHPVKQRGGIRAA
YGRHGVRHFVVDHADELAKVLAETGGASDMVIVVRLATARGAAVYDLGGKFGTSPAQAAA
LLRQAHGAGCRVGLSFHVGSQCLTPGSYTAALRLAAHTLDLAGVPLSVIDVGGGFPVAYV
GLHPPPLEDYVAAIRAGLAGMELPVGCELWCEPGRALVAAGASLVVRVELRRDNFLYIND
GVYGSLSDLKYAGLRFPMRVLRPVGDRVEVLEHDLGEFSLFGPTCDAVDVMEGPYRLAAD
VREGDYIEIGQAGAYTLELRTDFNGFCPDRFVEVGDGAFLPTAEMEPAPFLSAAAE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcccttcaccgctccccttgccgcgcatgagcacgccacccatgagcatacg
gcttacgaggatgcggccgccatggtcgcggcgcttcggccggaacagccggtctattgc
atccgcccgcacgtcctgagggaagcggcccggcacttcgtcgagacgttccccggcaag
gtcctttatgcggtcaaatgcaacgcggagccggcgttcctggacgccctgtacgagggc
ggcatccgccacttcgacaccgcgtcgctgccggagatcgcggtcgtcgccgagcgcttc
gccgacaccacctcctatttcatgcatccggtcaagcagcggggcggcatccgcgcggcc
tatggtcggcacggcgtccggcatttcgtggtggaccatgccgacgaactcgccaaggtg
ctggccgagacgggcggggccagcgacatggtgatcgtggtccggctggcgacggcgcgc
ggcgccgcggtctacgatctcggcggcaagttcgggacgtccccggcgcaggccgcggcg
ttgctcaggcaggcccacggggcggggtgccgggtcggcctgtcgttccatgtcggctcg
cagtgcctgacgcccggttcctacacggcggcgctgcggctcgcggcgcacacgctcgac
ctcgccggggtgccgctgagcgtgatcgacgtgggcggcggctttcccgtcgcttatgtc
ggcctgcacccgccgccgctggaggactatgtcgccgcgatccgggccgggctggccggg
atggagcttccggtggggtgcgaactgtggtgcgagcccggccgggcgctggtcgccgcc
ggcgcgtcgctggtggtccgcgtcgagctacggcgcgacaatttcctgtacatcaacgac
ggcgtctacggcagcctgtccgacctgaaatatgccgggctgcgctttcccatgcgcgtg
ctgcggcccgtcggggaccgggtcgaggtgcttgagcatgacctgggggagttcagcctg
ttcgggccgacctgcgacgcggtcgacgtgatggaaggcccgtaccggctggcggccgac
gtgcgggagggcgactacatcgagatcgggcaggccggagcctatacgctggaactgcgc
accgacttcaacggcttctgccccgaccgcttcgtggaggtcggcgacggcgccttcctg
ccgacggccgagatggagccggccccgttcctgagcgccgccgccgagtag
DBGET
integrated database retrieval system