Skermanella mucosa: JL100_008905
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Entry
JL100_008905 CDS
T07652
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00900
Terpenoid backbone biosynthesis
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JL100_008905
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smuc01006
]
JL100_008905
Enzymes [BR:
smuc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JL100_008905
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JL100_008905
2.5.1.29 geranylgeranyl diphosphate synthase
JL100_008905
Prenyltransferases [BR:
smuc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JL100_008905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UEM22846
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All DBs
Position
SKMUc:1961779..1962648
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AA seq
289 aa
AA seq
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MDVVMRIEQTLDGALSEAEASGAPPRLAAAMRHAVFPGGARIRPRLCFAVARACGAEEFS
TAAAAAAAIELLHCASLVHDDLPCFDDAPVRRGKPSVHRAFGEPLAVLAGDALIVLAFET
LARQAAACPNRLATLMLCIGRSVGMPFGIVAGQAWESEPRVDLARYHRAKTGALFAAATV
GGAAAAGVESAPWRSLGEKIGEAFQVADDIRDVAGNPDELGKPVGRDAALGRMSAARELG
IDGALDRLDLLIGEAAESIPRCPGAAELRALIRLEAERFLPKELVRVAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgtcatgcggatcgaacagaccctggacggggccttgagcgaggcggaggca
tccggcgctccgcccaggctggcggcggcgatgcggcacgccgtgtttcccggcggcgcc
cggatccggccccgcctgtgcttcgcggtggcccgggcctgcggcgcggaggagttctcg
accgccgccgcagctgccgccgcgatcgagcttttgcattgcgcatcgctggtccacgac
gatctgccctgcttcgacgacgcgccggtgcggcgcggcaagccttccgtccaccgggcc
ttcggcgaacccttggcggtgctcgccggcgacgcgctgatcgtgctggcgttcgagacg
ctggcgcgccaggccgcggcctgtcccaaccggctggcgactttgatgctctgcatcgga
cgctcggtcgggatgccgttcggcatcgtggcggggcaggcgtgggagagcgagccgcgg
gtcgatctcgcccgctaccacagggccaagaccggcgcgctgttcgcggccgcgacggtc
ggcggcgccgcggcggccggcgtggaatcggcgccctggcgctccctgggcgagaagatc
ggcgaggcgttccaggtcgcggacgacatccgcgacgtcgccgggaaccccgacgagctg
ggcaagccggtggggcgggacgccgccctcggccggatgagcgccgcgcgcgagctgggc
atcgacggcgccctcgaccgcctcgacctgctgatcggggaggccgccgagtcgatcccg
cgctgcccgggcgccgccgagcttcgggcgctgatccgcctggaagccgagcgcttcctg
cccaaggaactggtgagggttgcagcatga
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