Skermanella mucosa: JL100_020160
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Entry
JL100_020160 CDS
T07652
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K23549
uptake hydrogenase large subunit [EC:
1.12.99.6
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00633
Nitrotoluene degradation
smuc01120
Microbial metabolism in diverse environments
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
JL100_020160
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_020160
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
JL100_020160
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Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
UEM19390
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Position
SKMUc:4332618..4333802
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AA seq
394 aa
AA seq
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MNARAGIEGTLSFQIMVIDSTVADVRLKSSRGTGIDRMLAGRPVADALSLVPMLFSLCGT
AQGVAAARACEAAAGIVPAGAHQAAREILILGEMVASHAWQLAIEWPRLMEEAPDPGILL
GIRRRVSALAESLYPARDWTRPGGGALKPDAIALDDALDHIAGAVEALVGAGFEEIRDGE
DLARWSRRTGTTAARLISRVMADDMAGFGRSGVARLPGLPDRWFADRLSADPGFATAPDL
DGGPAETGALGRAAGTPLMVALTGCFGNGLLPRFAARLVDLSGLPARMRDAARLLEAVRP
APPDSVQGITGSGAGSAETARGRLAHWIALNRGAVTTYRSVAPNEWNFHPRGAFVRGLVG
LPADDGLRRRVDLLIAALDPCVPCHVMMEERAGA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcgcgccggcatcgagggtaccctctctttccagatcatggtcatcgactcc
acagtggccgacgtgcgccttaaatcgtcgcgaggaaccggcatcgaccgcatgctggcg
ggacgccctgtggccgacgccctgtcgctggttcccatgctgttcagcctgtgcgggacc
gcccagggcgtcgccgccgcccgggcctgcgaggcggcggcgggcatcgtcccggcgggc
gcgcatcaggcggcgcgcgagattctgatactgggcgaaatggtcgccagccacgcctgg
caactggcgatcgagtggccgcgcctgatggaggaggcacctgaccccggtatccttctc
gggatccgccgccgcgtctcggcgcttgccgaatcgctctatcccgcgcgcgactggacc
cggccgggcggcggcgcgctcaaacccgacgccatcgccctggacgatgcgctggaccat
atcgccggcgcggtcgaggcactggtcggtgccggcttcgaggagatccgggacggcgag
gatctcgcccgctggagccgccggaccggcacgacggcggcccggctgatcagccgcgtc
atggccgacgatatggcgggcttcgggcgtagcggggtagccaggctgcccggcctgccg
gaccgctggttcgccgaccggctctcggccgatccgggcttcgccacggccccggacctg
gacggcgggccggcagagaccggcgccctgggccgggccgccggcacgccgctgatggtc
gccctgaccggttgcttcggcaacggcctgctgccgcgtttcgcggcacggctggtcgac
ctgtcgggcttgccggcccggatgcgcgacgccgcgaggctgctggaagccgtccggccg
gctccgccggactccgtccaggggatcacgggctccggcgcgggctcggcggagacggca
cgcggccggctcgcccactggatcgcgctgaaccggggagcggtgaccacctaccggtcg
gtcgctcccaacgagtggaatttccacccgcgcggcgccttcgtccggggattggtgggc
ctgccggccgacgacggcctgcgccggagggtcgacctgctgatcgccgcgctggacccc
tgcgtcccgtgccacgtgatgatggaggaacgcgccggtgcatga
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