Skermanella mucosa: JL100_022215
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Entry
JL100_022215 CDS
T07652
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00500
Starch and sucrose metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
Module
smuc_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JL100_022215 (glgX)
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JL100_022215 (glgX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
UEM19776
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All DBs
Position
SKMUc:complement(4770034..4772148)
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AA seq
704 aa
AA seq
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MLEIEPMPVPSDLTHGLPRGASSPLGATPCRDGTNFSVFSKHATGVDLLLFDHADDAQPA
RVIRIDPASNRTGHYWHVFVPGVTASQLYGYRVEGPWDPSRGMRFDPAKVLLDPYGRGVA
VPDRYSRDAAKRTGNNSATAMKSVVVEPSAYDWEGDQPLRRSSAQTIIYEMHVKGFTRHP
SSGVGERISGTFAGLIAKIPYLQRLGITAVELLPVFQFDAQDCPAGKVNYWGYAPVSFFA
PHQAYSSRQGPLGPVDEFRDMVKALHRAGIEVILDVVFNHTAEGGGDGPTLCFRGLDNTA
YYILGEDRSHYGNYTGTGNTLNANHPVVRRMIVDSLRYWVKDMHVDGFRFDLASILARDP
SGQPIPNPPVLWDIDTDPALAGTKLFAEAWDAAGLYQVGSFIGDSWKEWNGRFRDDVRAF
FRGEPGSAALMADRLVGSPNIYGHEEREAEQSVNFVTCHDGFTLNDLVSYNDKHNEANGE
DNRDGADDNRSWNCGVEGPSDDPAVETLRNRQVKNFLTVTLLSIGMPMILMGDEVLRTQS
GNNNAYCQDNEISWFDWALVEKHADMLRFVTLLNAWRRMRDTAHERRRWSLNELIRHADK
TWHGVKVGQPDWGEHSHAFAFEARLRREGLHMYLILNAYWKPLEFELPPVGGTGSWRRWI
DTALASPRDISRRGTAASVPGCTYRAAAHSVVVLVEGSGGAMLP
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagatcgaaccgatgccggtgccgtcggacctgacccatggcctcccgcgagga
gccagttctcccctgggagcgacgccgtgccgcgacgggacgaacttcagcgtgttctcg
aagcatgccaccggggtcgatctgctgcttttcgatcatgccgacgacgcgcagcccgcc
cgcgtgatccgcatcgaccccgcatccaatcgcaccgggcactattggcacgtgttcgtc
cccggcgttacggcaagccagctctacggctatcgtgtcgaagggccgtgggatccttcg
agaggcatgcgcttcgatcccgccaaggtccttctcgacccctatggccggggcgtggcc
gttccggatcgctacagccgcgatgccgccaaaaggaccggcaacaacagcgcgaccgcg
atgaaaagcgtcgtggtcgagccgtccgcctatgactgggaaggcgaccaaccgctgcga
aggtcatcggcgcagaccatcatctacgaaatgcatgtgaagggcttcacccgccatccc
agctccggcgtcggcgagaggatcagcggcaccttcgccggcctgatcgcaaagatcccc
tatctccagcggctggggatcaccgcggtcgagctgctgccggtgttccagttcgacgcg
caggattgcccggcaggaaaggtcaactactggggctatgcgccggtctcgttcttcgcc
ccgcatcaggcgtacagctcacgacaggggccgctcggcccggtcgacgagttccgcgac
atggtcaaggcgctgcaccgggcgggcatcgaggtcatcctcgatgtcgtgttcaaccac
accgcggaaggcggcggggacgggccgacgctgtgtttccgcgggctggacaacacggcg
tactacatcctgggggaggaccgctcgcactacggcaactacaccggcaccggcaacacc
ctcaacgccaaccacccggtcgtccgccggatgatcgtggacagccttcgatactgggtg
aaggatatgcacgtggacggcttccggttcgatctcgcgtcgatcctggcgcgggacccc
tctggccagccgatcccgaacccgccggtcctgtgggacatcgacacggacccggcgctc
gcgggcaccaagcttttcgccgaagcctgggacgcggcgggtctgtaccaggtcggcagc
ttcatcggagacagctggaaggagtggaacggcagattccgtgacgatgtcagggccttc
ttccgtggcgagccgggatcggcggcgctgatggcggaccggctggtgggcagccccaac
atctacgggcacgaggaacgcgaagcggagcagagcgtcaacttcgtcacctgtcacgac
ggtttcaccctcaacgatcttgtgtcctataatgacaagcacaacgaggccaatggggag
gacaaccgcgacggcgctgacgacaaccgcagttggaactgcggcgtggagggcccgtcc
gacgatccggccgtcgagacattgcggaaccgccaggtcaagaacttcctgaccgtcacg
ctgctctcgatcggcatgcccatgatcctgatgggtgacgaggtgctgcgcacccagtcc
ggcaacaacaacgcctactgccaggacaacgagatcagctggttcgattgggctctggtc
gagaagcatgcggacatgcttcgtttcgtgaccctgctcaatgcatggcggcgcatgcgc
gacacggcgcacgagcgccggcgctggagcctgaacgagctgatccggcatgcggacaag
acatggcacggcgtgaaggtcgggcagccggactggggtgagcattcccacgccttcgct
ttcgaggcgcggctccggcgggaaggactccacatgtacctgatcctgaacgcgtactgg
aagccgctggaattcgagctgccgccggtgggcggtaccgggtcatggcgtcgatggatc
gataccgcgctcgcctcacctcgggacatcagccggagggggacggcagcctcggtgccc
ggctgcacgtatcgggcggcggcgcactccgtcgtcgtcttggttgaaggatcgggaggg
gcgatgcttccctga
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