KEGG   Serratia marcescens WW4: SMWW4_v1c10150
Entry
SMWW4_v1c10150    CDS       T02448                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smw  Serratia marcescens WW4
Pathway
smw00740  Riboflavin metabolism
smw01100  Metabolic pathways
smw01110  Biosynthesis of secondary metabolites
smw01240  Biosynthesis of cofactors
smw02024  Quorum sensing
Module
smw_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:smw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SMWW4_v1c10150 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMWW4_v1c10150 (ribD)
Enzymes [BR:smw01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SMWW4_v1c10150 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SMWW4_v1c10150 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AGE16819
LinkDB
Position
1127760..1128869
AA seq 369 aa
MHHDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMA
GDKARGATAYVTLEPCSHHGRTPPCADALVAAGVTRVVAAMQDPNPQVAGRGLYKLQQAG
VEVRHGLMLAEAEAVNLGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPEARQD
VQRLRAQSAAILSTSATVLADDPSLTVRWDELDAETQRLYPRENLRQPLRILLDSQNRIT
PQHRVVQQPGATWLARLQADEQTWPQDVEQFICPAHGGGVDLVVMMMLLAKRQVNSIWVE
AGASLAGALLQAGLVDELILYIAPKLLGDNGRGLCHLPGLERLADAPEFVFSDVRQVGPD
LRLRLRAKH
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcatcacgacgaattttacatggcgcgcgccttcgaactggcgcgcctggggcgtttc
accaccgcgcccaatccgaacgtcggctgcgttatcgtgcgcgatggcgaaattgtcggt
gaaggctatcacttgcgcgccggcgagccgcacgcggaagtgcacgcgctgcgtatggcg
ggcgacaaggcgcgcggcgccaccgcctatgtcacgctcgaaccgtgcagccatcacggc
cgcacgccgccctgcgccgatgcgctggtggccgccggcgtaacgcgagtggtcgcggcg
atgcaagatcccaatccgcaggtggcggggcgcgggctgtacaagctgcagcaggccggc
gtcgaggtgcgtcatggcctgatgctggccgaagccgaagcggtcaacctgggcttcctc
aaacgcatgcgcaccggtttcccctatgtgcaactgaagctgggcgcgtcgctggacggg
cgcacggcgatggcctccggcgagagccagtggatcacctcacccgaagcgcgtcaggac
gtgcagcgcctgcgcgcgcagagcgccgcgattctcagcaccagcgccaccgtgctggcg
gacgatccgtcgctgacggtgcgttgggatgagttggatgccgagacccagcgcctctat
ccgcgcgaaaatctgcgtcagccgctgcgcatcctgctcgacagccaaaatcgcattacc
ccacagcaccgcgtggtgcagcagccgggcgccacctggctggcgcggctgcaggcggat
gaacagacctggccgcaagacgttgagcagtttatctgcccggcgcacggcggcggcgtc
gatctggtggtgatgatgatgctgttggccaagcgccaggtgaattcaatctgggtggag
gcgggcgcatcgctggccggcgcgctgctgcaggccggcctggtggatgagctcattttg
tacatcgcgccaaaactgttgggcgataatggccgcggcctgtgtcatttgccgggcctt
gagcgtctggccgacgcaccggaattcgtctttagcgacgtgcgccaggtcggccccgat
ctgcgtttgcgcctgcgggcgaaacactga

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