Serratia marcescens WW4: SMWW4_v1c38920
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Entry
SMWW4_v1c38920 CDS
T02448
Name
(GenBank) lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00310
Lysine degradation
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SMWW4_v1c38920
Enzymes [BR:
smw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SMWW4_v1c38920
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AGE19679
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All DBs
Position
complement(4198336..4200480)
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AA seq
714 aa
AA seq
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MNIIAIMGPTGVYYKDEPIRELHAALAAMGFQLVYPKNSGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINTHSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADI
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQREFTRESIAARVQATPNATWPVH
AVITNSTYDGLLYNTDYIKQTLEVPSIHFDSAWVPYTNFHPIYDGKSGMSGERVPGKVFY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPHYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLDPDDNWHGFGQTD
RDHMYLDPIKVTILTPGMNELSALEEEGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLYAEDPDFYRHMRIQDLAAGIHRLIRQH
DLPGLMQRAFDVLPEMKLTPHQMFQEQVRGNVETCELDQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGCYLVKVLKAPQT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgccatcatgggcccgacgggcgtctactacaaagatgagccgattcgc
gagctccacgctgcgctggccgccatgggattccagctggtgtaccccaaaaacagcggt
gatctgctgaagctgatcgaagccaacgcccgcatctgcggggtgatcttcgactgggac
gactacagcctggagctgtgcagcgagatcaacgagctgaacgaatacctgccgctgtac
gcctttatcaatacccactccaccttcgacgtcagcctgcatgaaatgcgcatggtgctc
tatttcttcgagtacggcctgaacgcggcggacgacatcgcgcagcgcatccagcagtac
accgcggaatatatcgacaccatcacgccgccgctgaccaaggcgctgttcaactatgtg
cgcgaaggcaagtacactttctgcacgccgggccacatggccggcactgcgtttcaaaaa
agcccggtgggctgcctgttctatgacttcttcggcgccaataccctgaaggccgacatc
tcgatttcggttaccgagctcggttcgctgctggatcataccgggccgcacctggaggcc
gaagagtatatcgcgcgcaccttcaacgccgagcagagctatctggtcaccaacggcacc
tccaccgccaacaagatcgtcggcatgtattcggcgccggcgggcagcacggtactgatc
gaccgcaactgccacaaatcgctgtgccacctgctgatgatgagcgatatcgtgccgatc
tatctgcgcccgctgcgcaacgcctacggcatcctcggcgggatcccgcagcgcgaattc
acgcgtgagagcatcgccgcccgggtgcaggcgacgccgaacgccacctggccggtgcat
gcggtgatcaccaactccacctatgacggcctgttgtacaacaccgactacattaagcag
acgctggaggtgccgtcgatccacttcgactccgcctgggtgccttacaccaacttccat
ccgatttacgacggcaagagcggcatgagcggcgagcgggtgcccggcaaggttttctac
gaaacccaatccacccacaagctgctggccgccttctcgcaggcctcgatgattcatatc
aagggtgactacgatgagagcaccttcaacgaagcctacatgatgcacaccaccacttcg
ccgcactacggcatcgtggcgtcgatggagaccgccgccgccatgctgcgcggcaacccg
gggcgccgtttgatcaaccgttcggtggaacgcgcgctgcattttcgccgtgaagtgcag
cggctgcgcgaggaaagcgacagctggttcttcgatatctggcagccggaagagatcgat
gaggcgcagtgctggccgctggatccggacgataactggcacggtttcggccagaccgat
cgcgatcatatgtacctcgatccgatcaaggtgacgatcctgacgccgggcatgaatgag
ctgagcgcgctggaggaagaggggatcccggcggcgctggtggcgaagtatctcgacgaa
cgcggcatcgtggtggagaagaccgggccgtacaacctgctgttcctgttcagcatcggc
atcgataaaaccaaggcgatgagcctgctgcgcggcctgaccgacttcaagcgcgcctac
gatctcaacctgcgggtgaagaacatgctgccggatctgtacgccgaagatccggatttc
tatcgccatatgcgcatccaggatctggccgccggcattcatcgcctgatccgccaacac
gatctgccaggcctgatgcagcgggcgttcgacgtgctgccggaaatgaagctgacgccg
caccagatgttccaggagcaggtgcgcggcaatgtcgaaacctgcgagctggatcagctg
gtgggcaaggtggcggccaatatgatcctgccttatccgccgggcgtgccgttggtgatg
ccgggggaaatgatcaccgaagagagccgggcggtgctcgatttcctgctgatgctatgc
tcgatcggtgagcgctatcccggttttgaaaccgatatccacggcgccaaactgacggaa
gacgggtgctatctggtgaaggtgctgaaagccccgcagacataa
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