KEGG   Sinorhizobium meliloti SM11: SM11_chr2454
Entry
SM11_chr2454      CDS       T01885                                 
Symbol
ribD
Name
(GenBank) probabable riboflavin biosynthesis protein (deaminase/reductase)
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smx  Sinorhizobium meliloti SM11
Pathway
smx00740  Riboflavin metabolism
smx01100  Metabolic pathways
smx01110  Biosynthesis of secondary metabolites
smx01240  Biosynthesis of cofactors
smx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SM11_chr2454 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SM11_chr2454 (ribD)
Enzymes [BR:smx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SM11_chr2454 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SM11_chr2454 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AEH79707
UniProt: F7X4C1
LinkDB
Position
complement(2415669..2416874)
AA seq 401 aa
MGEPAREDERFMAAALRLARRNLGLTSTNPSVGCIIVNKGTIVGRAVTAPGGRPHAETQA
LAEAGEKARGATAYVALEPCSHHGKTPPCADALIASGVGRVVVSILDPDERVAGRGVVML
RGAGIDVDIGTLHEEGGRVLEAYLMRQRKKRPHVTLKLAVSADGMIGRRGEGQVRISGAV
SRAQVQVLRAETDAILVGIGTAIADDPELTVRMPGLEERSPVRIVLDRRLDLPLESKLVR
TARDVPLIVVTGDAGYPSSHEQGAGARRADEGQSSLPLSSGSTREPVLSPLAEAGTDYDA
RRGALEAAGAELLSADTIPDLLAALASRGISSLLVEGGARAARSFLDADLVDRILLFTGP
AAIGEGGISSPFQRTSVPEGFTLRRTARYGDDIFEDYERDS
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgggcgagccggcacgtgaagacgaacgtttcatggcggcggcgctgcggcttgcaagg
cgcaatctcggcctgacttccaccaatccctcggtcggctgcatcatcgtcaacaagggc
acgatcgtcggccgagccgtgaccgctccgggcgggcgaccgcacgcggaaacgcaggcg
cttgcggaggcgggcgaaaaggcgaggggagcgaccgcctatgtcgccctcgaaccctgc
tcgcatcatggcaagaccccgccctgcgcagatgcgctgatcgcctcgggggtcggccgt
gtcgtcgtttccatcctcgatcccgatgaacgcgttgccggccgcggcgtggtgatgctt
cgcggcgccggcattgacgtcgacataggcacgctccatgaagagggcgggcgtgtgctc
gaggcctacctcatgcgtcagcgcaagaaacgcccgcatgtgactctgaaacttgcggtt
tccgcggacggcatgatcggacggagaggcgaggggcaggtgaggatttccggtgccgtc
tctcgcgcccaggtgcaggtgttgcgtgccgagacggacgcgatcctcgtcggtatcggt
acggccattgccgacgatccggaacttacggtgcggatgccagggctggaggagcgctct
ccggtccggatcgtgctcgaccgccgcctcgatctgccgctcgagtcgaaattggtccgc
actgcgcgcgacgttccgctgatcgtcgtaacgggagacgcgggctatccttcttcccac
gagcagggagcaggtgcccgaagggcggatgaggggcagagcagtttgcccctctcctcg
ggttcgacccgagaaccagtcctctctccgctcgcggaggcagggaccgattacgacgcc
cgtcgaggagccctcgaagctgcgggggccgagctgctgagcgccgataccatcccagac
ctcctggccgcacttgcatcccggggcatctcctccctgctcgtggagggtggggccaga
gcggcgcgttcctttctcgatgcggatctggtggatcgaatcctgcttttcaccggtccg
gcagccattggcgaaggtggtatttcatccccatttcaaaggacgtcggtgccggagggc
ttcacgcttcgccgcacggcgcgctatggcgacgatattttcgaggattacgagagagat
agctga

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