Sinorhizobium meliloti SM11: SM11_chr3395
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Entry
SM11_chr3395 CDS
T01885
Symbol
ispA
Name
(GenBank) geranyltranstransferase protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00900
Terpenoid backbone biosynthesis
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SM11_chr3395 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smx01006
]
SM11_chr3395 (ispA)
Enzymes [BR:
smx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SM11_chr3395 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SM11_chr3395 (ispA)
Prenyltransferases [BR:
smx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SM11_chr3395 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AEH80630
UniProt:
F7X1R6
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All DBs
Position
3406447..3407499
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AA seq
350 aa
AA seq
DB search
MRWRAKVERPFSQKARLCSAVIPGPALCAATPKPVESRSAACQRAFMKDERSSFPARLKT
NAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAESTALLGGDAE
AALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGDSLLTFAFDI
VAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVLLQSMKTGAL
IRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTADAAIVGKATGKDAARG
KGTLVSLHGQPWAERRLESLVAEAEGLLEPYGPRSAILAETARFIANRRN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggcgagcgaaagttgaacggcctttctcgcaaaaggcaaggctctgcagcgcc
gtcatccccggaccagccctgtgcgctgcgacgccaaagcccgttgaaagccgctccgcc
gcgtgtcaaagagcctttatgaaagacgagagatcatcctttccggcgcgcctcaagacc
aacgcggtcgcggtcgaagcgctgctcgagacattgctcggtccggccgtgggcacgggc
gaaatcgcccgcccggcaaacctgctcggagccatgcgccatggcgtgctcaacggcggc
aagcggctgcggccttttctcgtcgccgaaagcacggccctcctcggcggcgatgcggaa
gcggcgctcagaacaggcgccgcgctcgaatgcatccactgctattcgctcgtccatgac
gacctcccggccatggacgacgacgacatgcgccgcggaaagccgacggtgcacgtcgcc
ttcgacgaggcgacggcgatccttgcgggcgacagcctgctgaccttcgccttcgacatc
gtcgcggcgccggaaacggcgctctccgaccgtcagaagacgacgctcgtgctggcgctc
gcgcgcgccgcggggcatgggggcatggccggcggtcaggcgctcgacctagccgccgaa
aagagcgcccccgacgaagcgggcatcgtcctcttgcagtcgatgaagacaggtgccctc
atccgcttcgcctgcgaggcgggcgcgatcatcgccgatgcgccggcagaggaccgccga
cggctgcgcgccttcggggacaagatcggcctcgccttccagcttgccgacgacctgctc
gacctcaccgccgatgccgcaatcgtcggcaaggcgaccggcaaggatgccgcacggggg
aagggcacgcttgtctccctgcatggccagccctgggccgagcggcggctcgaaagcctg
gtggccgaggcggaaggcctgctcgaaccctacggaccacgctcggcgatccttgccgaa
accgcccgcttcatcgccaaccgcaggaactga
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