Sinorhizobium meliloti SM11: SM11_pC1139
Help
Entry
SM11_pC1139 CDS
T01885
Symbol
gabD4
Name
(GenBank) GabD4 succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00250
Alanine, aspartate and glutamate metabolism
smx00310
Lysine degradation
smx00350
Tyrosine metabolism
smx00650
Butanoate metabolism
smx00760
Nicotinate and nicotinamide metabolism
smx01100
Metabolic pathways
smx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SM11_pC1139 (gabD4)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SM11_pC1139 (gabD4)
00310 Lysine degradation
SM11_pC1139 (gabD4)
00350 Tyrosine metabolism
SM11_pC1139 (gabD4)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SM11_pC1139 (gabD4)
Enzymes [BR:
smx01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SM11_pC1139 (gabD4)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SM11_pC1139 (gabD4)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SM11_pC1139 (gabD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AEH82212
UniProt:
F7XF87
LinkDB
All DBs
Position
pSmeSM11c:complement(1040627..1042099)
Genome browser
AA seq
490 aa
AA seq
DB search
MTISETLLVKLKDPSLAVDKGLIGAEWLDRSDSGKTFDVSNPATGEVIAILPDMSRSETA
RAIDAAHAAQRAWAEKTGKERAAVLRNLYDLVVANADDLATILTMEMGKPLTEAKGEILY
GASYVEWFGEEAKRVYGDTIPGHQPDKRIIVLKQPIGVVAAITPWNFPNAMLARKLAPAA
AAGCAVVSKPAAETPLSALALALLAERAGLPAGVFNVILSTDSAEVGKEMCANDKVRKLT
FTGSTNVGKILMRQGADQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVAKYRNNGQTCV
CANRIFVQAGIYDAFAARLTAKVSEMTIGDGFEPDVDAGPLISEKALAKVEEHIRDAVTK
GADLVLGGNARGGLFFEPTVLTGATMDMKIAGEETFGPVAPLFKFETENEVVSMANKTEF
GLASYFYSKDVSKVFRVAEALEYGMVGINTGLISTEVAPFGGVKQSGQGREGSKYGIDDY
VETKYLCLSI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcggaaacacttctcgtcaaactgaaggatcccagcctcgctgtcgacaag
ggtttgatcggcgccgaatggcttgacagaagcgacagcggcaagacgttcgatgtcagc
aatccggcgaccggcgaggtcatcgccatcttgcccgacatgagtcggtccgaaaccgca
cgtgcgatcgatgcggcccacgcggcgcaaagggcatgggcggagaagacgggcaaggaa
cgcgccgcggtgctgcgcaacctctacgacctcgtggttgccaatgccgacgacctcgcc
accatcctgacgatggaaatgggtaagccgcttacggaggcgaagggcgagattctctac
ggcgcgtcttacgtcgagtggtttggcgaggaggcgaagcgcgtctacggcgacacgatt
ccgggccaccagccggacaagcgcatcatcgtcctcaaacagccgatcggggtcgtggcg
gcgatcacgccgtggaattttccgaatgcgatgctcgcccgaaaactggcgcctgccgct
gccgcaggctgcgcagtggtttcgaagcctgccgcggagacgccgctgtcggcgctggcg
ctagccttgctcgcagaacgcgccggcctgcctgccggagtcttcaacgttatcctgtcg
accgattccgcggaagttggcaaggaaatgtgtgccaatgacaaggttcgcaagctgacc
ttcaccggctccaccaacgtcggcaaaatactgatgcgccagggcgccgaccagatcatg
aagctgggtctggaactcggaggcaacgcgccgttcatcgtctttgacgacgccgatctc
gacgccgctgtcgaaggcgccatggtcgccaagtaccgcaacaacgggcagacctgcgtc
tgcgccaataggattttcgtgcaggccggaatttacgacgcctttgccgcgaggctgact
gccaaggttagcgagatgacgatcggcgacgggtttgagccggacgtcgacgctggcccg
ctgatctccgaaaaggctctcgccaaggtcgaggaacatatccgggacgcggtgacgaag
ggtgccgatctggttctgggcggcaatgcgcggggcggattgtttttcgagccgaccgtc
ctgaccggagccaccatggacatgaagattgctggcgaggagacgttcggcccagtcgcg
ccgctcttcaagttcgagaccgagaatgaagttgtcagtatggccaacaagaccgagttc
ggcttagcatcctatttttactccaaggatgtgagtaaggtattccgcgtggcggaagcg
ctagaatacggcatggtgggcatcaatacaggcctgatctctacggaagtagcgcccttc
ggcggtgtcaagcagtcggggcaaggccgcgaaggctccaaatacggcatcgatgactat
gtggaaaccaagtatctttgcctcagtatttga
DBGET
integrated database retrieval system
