Sphingomonas melonis: BJP26_08090
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Entry
BJP26_08090 CDS
T04509
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
smy
Sphingomonas melonis
Pathway
smy00190
Oxidative phosphorylation
smy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BJP26_08090
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJP26_08090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smy03019
]
BJP26_08090
Enzymes [BR:
smy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BJP26_08090
Messenger RNA biogenesis [BR:
smy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BJP26_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AOW23539
LinkDB
All DBs
Position
1682851..1685016
Genome browser
AA seq
721 aa
AA seq
DB search
MTRPAHLAHLTDADDDPFVPEVNDRYFNRELSWLAFNRRVLEEACNGSHPLLERLRFLSI
SGTNLDEFFMVRVAGLKGQQLKDVDRRSTDGLTPAQQLAAITAEADSLMASQQAVWGDLR
TALDEAGVHVLRRDEVDAEAAVWLEQHFREQIFPILTPQALDPAHPFPFIPNKGLSVMFD
VVRDSDGEPVRELVMIPASAPRFVRLPGEVARYVSIEALLKRFAYVLFPGYTLVGAAAFR
VLRDSDIEIDEEAEDLVRYFANAIKRRRRGRVIRLELETGMPDALADVLRNELGGADAIV
TESGNLLGIGDLDMVIDEDRPDLKFLPFVPRFPERIREFGGDCFAAIRAKDIIVHHPYET
FDVVLAFLKQAAADPDVIAIKQTLYRAGKQPAVINALIAAAEAGKSVTAVVELRARFDEE
QNILWASALERAGVQVVYGFLEWKTHAKVSMVVRREGGQFRTYCHFGTGNYHPVTARIYT
DLSFFTADARMGRDAAQMFNYVTGYVEPTDITKLALSPRDLRKTLLEQIDVEIANARSGK
PGAVWAKMNSLVDPIIIDKLYEASGAGVAVELIIRGICCLRPGVPGMSENIRVKSIIGRF
LEHSRIFCFGNGAALPNDNAHVFISSADWMPRNFDRRVEYMLPIENPTVHDQVLDQVMVA
NLIDTEQSWELEADGRYVRDEPGDKPFNLHRYFMNNPSLSGRGAALAESNAVPTLALRRR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcccagcccatctcgcccatctgaccgacgccgacgacgatcctttcgtcccc
gaggtcaacgatcgctatttcaaccgcgagctgtcgtggctggcgttcaaccggcgggtg
ctggaagaggcgtgcaacggatcgcatcccttgctggagcggctgcgcttcctgtcgatc
tcgggcaccaacctcgacgaattcttcatggtgcgcgtggctggcctcaaggggcagcag
ctgaaagacgtcgatcgccgctcgaccgatggtctgacgccagcacagcagctcgccgcg
atcaccgcggaggccgattcgctgatggcgagccagcaggcggtgtggggcgacctgcgc
accgcgctcgacgaggcgggcgtccatgtgttgcgccgcgacgaggtggacgccgaggcc
gcggtgtggctggaacagcatttccgcgaacagatcttcccgatcctgacgccccaagcg
ctcgatccggcgcacccgtttccgttcatcccgaacaaggggctgtcggtgatgttcgac
gtcgttcgcgattcggacggcgagccggtgcgcgagctggtgatgatccccgccagcgcg
ccgcgcttcgtacgcctgccgggcgaggttgcgcgctatgtgtcgatcgaggcgctgctc
aagcgcttcgcctatgtgctgtttcccggatacacgctggtcggtgctgcggcgttccgc
gtgctgcgcgacagcgatatcgagatcgatgaagaggccgaggatctcgtccgctacttc
gccaatgcgatcaagcgccgccgtcgcggccgcgtgatccggctggagctggaaacgggc
atgcccgatgcgctggccgacgtgctgcgcaacgaactgggcggggcggatgcgatcgtc
accgaaagcggcaacctgctcggcatcggcgacctcgacatggtaatcgacgaggaccgg
ccggacctcaaattcctgccgttcgtgccgcgctttcccgagcgcatccgcgaattcggc
ggcgattgtttcgcggcgatccgggcgaaggacatcatcgtccaccacccgtacgaaacc
tttgatgtggtgctcgccttcctgaagcaggcggcggcagacccggacgtcatcgcgatc
aagcagacgctgtaccgcgccggcaagcagcctgccgtcatcaacgcgctgatcgccgcg
gcggaggcgggcaaatcggtgacggcggtggtcgagctgcgcgctcggttcgatgaagag
cagaatattctatgggcgagcgcgctggaacgcgcgggcgtgcaggtggtctatggcttc
ctggagtggaagacgcacgccaaggtgtcgatggtggtacggcgcgagggcgggcagttc
cgcacctattgccacttcgggaccggcaattaccacccggtgaccgcgcgcatctacacc
gacctcagcttcttcactgcggacgcgcggatggggcgggatgcggcgcagatgttcaat
tacgtcacgggatatgtcgaaccgaccgatattaccaagctggcgctcagcccacgcgac
ctgcgcaagacgctgctggagcagatcgacgtcgagatcgccaatgcccgcagcggcaag
cccggtgcggtctgggcgaagatgaacagcctggtcgacccgatcatcatcgacaaattg
tacgaggcgagcggcgcgggcgtcgcggtggagctgatcatccgcggcatctgctgcctg
cggccgggcgtgcccggcatgtcggagaatatccgcgtgaaatcgatcatcggccgcttc
ctggagcacagccgcatcttctgcttcggcaacggcgcggcgctgcccaacgacaatgcg
catgtgttcatctcgtccgccgattggatgccgcgcaacttcgaccggcgcgtcgaatat
atgctgccgatcgagaacccgacggtgcatgaccaggtgctcgaccaggtgatggtcgcc
aacctgatcgacaccgagcagagctgggagctggaggcggacgggcgctacgtgcgggac
gagccgggcgacaagccgttcaacctgcaccgctatttcatgaacaatccatcgctgtcc
ggacgcggtgcggcgctggcggaaagcaatgcggtgcccactttggcgcttcggcggcgg
cgttag
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