Streptomonospora nanhaiensis: OUQ99_23925
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Entry
OUQ99_23925 CDS
T08686
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
snah
Streptomonospora nanhaiensis
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snah03009
]
OUQ99_23925 (rimO)
Enzymes [BR:
snah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OUQ99_23925 (rimO)
Ribosome biogenesis [BR:
snah03009
]
Prokaryotic type
ribosomal protein modification factors
OUQ99_23925 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WAE72232
LinkDB
All DBs
Position
complement(5532385..5533833)
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AA seq
482 aa
AA seq
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MSSRRTVSLVTLGCARNEVDSEELAGRLSAGGWDLVDGDTKADVTVVNTCGFIDAAKQDS
IETLLEAAENGGKVVAAGCMAERYGSELADALPEAQVIGFDDYSAITDRLDDVVAGRKLV
PHDPRDRRTLLPISPADRDASQVHVPGHAGFAEAPGADGTELPYRAAVPRRRLTGGPVAN
LKIASGCDRRCTFCAIPTFRGAYLSRHPDEIVREAEWLAGEGVREVFLVSENSTSYGKDL
GDVRALEKLLPRLAAVEGLERVRVSYLQPAEVRPGLVDVLTGTPGVVPYFDLSFQHASGT
LLRRMRRFGDRERFLELLETVRKRTPEAGARSNFIVGFPGETEAEFEDLVSFLSEARLDA
IGIFGYSDEDGTEALSHEGKLPAEVVQERVDRLNRLSEELMVQRAEERIGTEVTVLVESV
LEDGAYEGRADHQAPEVDGSTILYGEGLAVGDLVPATVVQSAGADLVAEQDETRPGGEAG
DR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccgtactgtctctctcgtcaccctggggtgtgcgcgtaacgaggtcgac
tccgaagagctggccgggcgtctgtccgcgggcggctgggacctcgtcgacggcgacacc
aaggccgacgtcaccgtggtcaacacctgcgggttcatcgacgcggccaaacaggactcc
atcgagaccctcctcgaagcggccgagaacggcggcaaggtcgtggccgcggggtgcatg
gcagaacggtacggctccgagctggccgacgccctccccgaggcccaggtcatcgggttc
gacgactactccgccatcaccgaccggctcgacgacgtcgtggccggccgcaagctcgtc
ccgcacgacccccgcgaccggcgcacgctcctgcccatcagccccgccgaccgcgacgcc
tcccaggtgcacgtccccggccacgcgggcttcgccgaggcgcccggggccgacggcacc
gagctgccctaccgcgcggcggtcccgcgccgccgcctcaccggcgggccggtcgccaac
ctcaagatcgcctcgggctgcgaccgccgctgcaccttctgcgccatcccgaccttccgc
ggggcctacctctcccggcaccccgacgagatcgtgcgcgaggccgagtggctggcgggg
gagggcgtccgcgaggtcttcctggtcagcgagaactccacgtcctacggcaaggacctg
ggcgacgtgcgcgccctggagaagctgctgccccgcctcgccgcggtggagggcctggag
cgcgtccgcgtcagctacctccagcccgccgaggtccgtcccggcctggtggacgtcctc
accggcacccccggcgtcgtcccctacttcgacctgtccttccagcacgccagcggcacc
ctgctgcgccgcatgcgccgcttcggcgaccgcgagcgcttcctggagctcctggagacc
gtgcgcaagcggacccccgaggccggggcgcgctcgaacttcatcgtgggcttccccggt
gagaccgaggccgagttcgaggacctggtctccttcctctccgaggcccgcctcgacgcc
atcggcatcttcggctactcggacgaggacgggaccgaggccctctcccacgagggcaag
ctcccggccgaggtggtccaggagcgcgtggaccggctcaaccggctctccgaggagctg
atggtccagcgggccgaggagcggatcggcaccgaggtgaccgtcctggtggagagcgtg
ctggaggacggcgcctacgagggccgggccgaccaccaggcccccgaggtggacggcagc
accatcctgtacggcgagggcctcgccgtcggcgacctggtgcccgccacggtcgtccag
tcggccggcgccgacctcgtcgccgagcaggacgagacccggccgggcggggaagccggg
gacagatga
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